Literature DB >> 29553524

A Neural Network-Based Identification of Developmentally Competent or Incompetent Mouse Fully-Grown Oocytes.

Federica Cavalera1, Mario Zanoni1, Valeria Merico1, Thi Thu Hien Bui2, Martina Belli3, Lorenzo Fassina4, Silvia Garagna1, Maurizio Zuccotti5.   

Abstract

Infertility clinics would benefit from the ability to select developmentally competent vs. incompetent oocytes using non-invasive procedures, thus improving the overall pregnancy outcome. We recently developed a classification method based on microscopic live observations of mouse oocytes during their in vitro maturation from the germinal vesicle (GV) to the metaphase II stage, followed by the analysis of the cytoplasmic movements occurring during this time-lapse period. Here, we present detailed protocols of this procedure. Oocytes are isolated from fully-grown antral follicles and cultured for 15 h inside a microscope equipped for time-lapse analysis at 37 °C and 5% CO2. Pictures are taken at 8 min intervals. The images are analyzed using the Particle Image Velocimetry (PIV) method that calculates, for each oocyte, the profile of Cytoplasmic Movement Velocities (CMVs) occurring throughout the culture period. Finally, the CMVs of each single oocyte are fed through a mathematical classification tool (Feed-forward Artificial Neural Network, FANN), which predicts the probability of a gamete to be developmentally competent or incompetent with an accuracy of 91.03%. This protocol, set up for the mouse, could now be tested on oocytes of other species, including humans.

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Year:  2018        PMID: 29553524      PMCID: PMC5931424          DOI: 10.3791/56668

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  13 in total

Review 1.  Molecular methods for selection of the ideal oocyte.

Authors:  P Patrizio; E Fragouli; V Bianchi; A Borini; D Wells
Journal:  Reprod Biomed Online       Date:  2007-09       Impact factor: 3.828

Review 2.  What does it take to make a developmentally competent mammalian egg?

Authors:  Maurizio Zuccotti; Valeria Merico; Sandra Cecconi; Carlo Alberto Redi; Silvia Garagna
Journal:  Hum Reprod Update       Date:  2011-03-28       Impact factor: 15.610

3.  Cytoplasmic movement profiles of mouse surrounding nucleolus and not-surrounding nucleolus antral oocytes during meiotic resumption.

Authors:  Thi Thu Hien Bui; Martina Belli; Lorenzo Fassina; Giulia Vigone; Valeria Merico; Silvia Garagna; Maurizio Zuccotti
Journal:  Mol Reprod Dev       Date:  2017-03-14       Impact factor: 2.609

4.  Chromatin organization during mouse oocyte growth.

Authors:  M Zuccotti; A Piccinelli; P Giorgi Rossi; S Garagna; C A Redi
Journal:  Mol Reprod Dev       Date:  1995-08       Impact factor: 2.609

5.  Contribution of the oocyte nucleus and cytoplasm to the determination of meiotic and developmental competence in mice.

Authors:  Azusa Inoue; Rui Nakajima; Masao Nagata; Fugaku Aoki
Journal:  Hum Reprod       Date:  2008-03-25       Impact factor: 6.918

Review 6.  Predictive value of oocyte morphology in human IVF: a systematic review of the literature.

Authors:  Laura Rienzi; Gábor Vajta; Filippo Ubaldi
Journal:  Hum Reprod Update       Date:  2010-07-16       Impact factor: 15.610

7.  Feed forward artificial neural network: tool for early detection of ovarian cancer.

Authors:  Ankita Thakur; Vijay Mishra; Sunil K Jain
Journal:  Sci Pharm       Date:  2011-07-05

8.  Phospholipase C-ζ-induced Ca2+ oscillations cause coincident cytoplasmic movements in human oocytes that failed to fertilize after intracytoplasmic sperm injection.

Authors:  Karl Swann; Shane Windsor; Karen Campbell; Khalil Elgmati; Michail Nomikos; Magdalena Zernicka-Goetz; Nazar Amso; F Anthony Lai; Adrian Thomas; Christopher Graham
Journal:  Fertil Steril       Date:  2012-01-02       Impact factor: 7.329

9.  Transcriptome based identification of mouse cumulus cell markers that predict the developmental competence of their enclosed antral oocytes.

Authors:  Giulia Vigone; Valeria Merico; Alessandro Prigione; Francesca Mulas; Lucia Sacchi; Matteo Gabetta; Riccardo Bellazzi; Carlo Alberto Redi; Giuliano Mazzini; James Adjaye; Silvia Garagna; Maurizio Zuccotti
Journal:  BMC Genomics       Date:  2013-06-07       Impact factor: 3.969

Review 10.  On Training Efficiency and Computational Costs of a Feed Forward Neural Network: A Review.

Authors:  Antonino Laudani; Gabriele Maria Lozito; Francesco Riganti Fulginei; Alessandro Salvini
Journal:  Comput Intell Neurosci       Date:  2015-08-31
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  3 in total

1.  The in vitro Analysis of Quality of Ovarian Follicle Culture Systems Using Time-Lapse Microscopy and Quantitative Real-Time PCR.

Authors:  Maxim Alexeevich Filatov; Denis Alexandrovich Nikishin; Yulia Vladimirovna Khramova; Maria L'vovna Semenova
Journal:  J Reprod Infertil       Date:  2020 Apr-Jun

Review 2.  Artificial intelligence in reproductive medicine.

Authors:  Renjie Wang; Wei Pan; Lei Jin; Yuehan Li; Yudi Geng; Chun Gao; Gang Chen; Hui Wang; Ding Ma; Shujie Liao
Journal:  Reproduction       Date:  2019-10       Impact factor: 3.906

3.  Using Deep Learning in a Monocentric Study to Characterize Maternal Immune Environment for Predicting Pregnancy Outcomes in the Recurrent Reproductive Failure Patients.

Authors:  Chunyu Huang; Zheng Xiang; Yongnu Zhang; Dao Shen Tan; Chun Kit Yip; Zhiqiang Liu; Yuye Li; Shuyi Yu; Lianghui Diao; Lap Yan Wong; Wai Lim Ling; Yong Zeng; Wenwei Tu
Journal:  Front Immunol       Date:  2021-04-01       Impact factor: 7.561

  3 in total

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