Literature DB >> 29550739

Fully 3D printed integrated reactor array for point-of-care molecular diagnostics.

Karteek Kadimisetty1, Jinzhao Song1, Aoife M Doto2, Young Hwang2, Jing Peng1, Michael G Mauk1, Frederic D Bushman2, Robert Gross3, Joseph N Jarvis4, Changchun Liu5.   

Abstract

Molecular diagnostics that involve nucleic acid amplification tests (NAATs) are crucial for prevention and treatment of infectious diseases. In this study, we developed a simple, inexpensive, disposable, fully 3D printed microfluidic reactor array that is capable of carrying out extraction, concentration and isothermal amplification of nucleic acids in variety of body fluids. The method allows rapid molecular diagnostic tests for infectious diseases at point of care. A simple leak-proof polymerization strategy was developed to integrate flow-through nucleic acid isolation membranes into microfluidic devices, yielding a multifunctional diagnostic platform. Static coating technology was adopted to improve the biocompatibility of our 3D printed device. We demonstrated the suitability of our device for both end-point colorimetric qualitative detection and real-time fluorescence quantitative detection. We applied our diagnostic device to detection of Plasmodium falciparum in plasma samples and Neisseria meningitides in cerebrospinal fluid (CSF) samples by loop-mediated, isothermal amplification (LAMP) within 50 min. The detection limits were 100 fg for P. falciparum and 50 colony-forming unit (CFU) for N. meningitidis per reaction, which are comparable to that of benchtop instruments. This rapid and inexpensive 3D printed device has great potential for point-of-care molecular diagnosis of infectious disease in resource-limited settings.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  3D Printing; Fluorescence and colorimetry; Isothermal amplification; Microfluidic chip; Nucleic acid isolation; Point of care diagnostics

Mesh:

Substances:

Year:  2018        PMID: 29550739      PMCID: PMC6172948          DOI: 10.1016/j.bios.2018.03.009

Source DB:  PubMed          Journal:  Biosens Bioelectron        ISSN: 0956-5663            Impact factor:   10.618


  49 in total

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Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

Review 2.  Miniaturized nucleic acid amplification systems for rapid and point-of-care diagnostics: a review.

Authors:  Farhan Ahmad; Syed A Hashsham
Journal:  Anal Chim Acta       Date:  2012-05-03       Impact factor: 6.558

Review 3.  3D printed microfluidics for biological applications.

Authors:  Chee Meng Benjamin Ho; Sum Huan Ng; King Ho Holden Li; Yong-Jin Yoon
Journal:  Lab Chip       Date:  2015       Impact factor: 6.799

Review 4.  Microfluidic diagnostic technologies for global public health.

Authors:  Paul Yager; Thayne Edwards; Elain Fu; Kristen Helton; Kjell Nelson; Milton R Tam; Bernhard H Weigl
Journal:  Nature       Date:  2006-07-27       Impact factor: 49.962

5.  Rapid and simple method for purification of nucleic acids.

Authors:  R Boom; C J Sol; M M Salimans; C L Jansen; P M Wertheim-van Dillen; J van der Noordaa
Journal:  J Clin Microbiol       Date:  1990-03       Impact factor: 5.948

Review 6.  Real-time PCR in clinical microbiology: applications for routine laboratory testing.

Authors:  M J Espy; J R Uhl; L M Sloan; S P Buckwalter; M F Jones; E A Vetter; J D C Yao; N L Wengenack; J E Rosenblatt; F R Cockerill; T F Smith
Journal:  Clin Microbiol Rev       Date:  2006-01       Impact factor: 26.132

7.  Development of a panel of recombinase polymerase amplification assays for detection of biothreat agents.

Authors:  Milena Euler; Yongjie Wang; Doris Heidenreich; Pranav Patel; Oliver Strohmeier; Sydney Hakenberg; Matthias Niedrig; Frank T Hufert; Manfred Weidmann
Journal:  J Clin Microbiol       Date:  2013-01-23       Impact factor: 5.948

8.  The global distribution of clinical episodes of Plasmodium falciparum malaria.

Authors:  Robert W Snow; Carlos A Guerra; Abdisalan M Noor; Hla Y Myint; Simon I Hay
Journal:  Nature       Date:  2005-03-10       Impact factor: 49.962

9.  Nuclemeter: a reaction-diffusion based method for quantifying nucleic acids undergoing enzymatic amplification.

Authors:  Changchun Liu; Mohamed M Sadik; Michael G Mauk; Paul H Edelstein; Frederic D Bushman; Robert Gross; Haim H Bau
Journal:  Sci Rep       Date:  2014-12-05       Impact factor: 4.379

10.  Clinical evaluation of a loop-mediated isothermal amplification (LAMP) assay for rapid detection of Neisseria meningitidis in cerebrospinal fluid.

Authors:  DoKyung Lee; Eun Jin Kim; Paul E Kilgore; Soon Ae Kim; Hideyuki Takahashi; Makoto Ohnishi; Dang Duc Anh; Bai Qing Dong; Jung Soo Kim; Jun Tomono; Shigehiko Miyamoto; Tsugunori Notomi; Dong Wook Kim; Mitsuko Seki
Journal:  PLoS One       Date:  2015-04-08       Impact factor: 3.240

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  23 in total

Review 1.  Interfacing Pathogen Detection with Smartphones for Point-of-Care Applications.

Authors:  Xiong Ding; Michael G Mauk; Kun Yin; Karteek Kadimisetty; Changchun Liu
Journal:  Anal Chem       Date:  2018-12-03       Impact factor: 6.986

2.  Acoustofluidic Scanning Nanoscope with High Resolution and Large Field of View.

Authors:  Geonsoo Jin; Hunter Bachman; Ty Downing Naquin; Joseph Rufo; Serena Hou; Zhenhua Tian; Chenglong Zhao; Tony Jun Huang
Journal:  ACS Nano       Date:  2020-06-23       Impact factor: 15.881

Review 3.  Point-of-care diagnostics for infectious diseases: From methods to devices.

Authors:  Chao Wang; Mei Liu; Zhifei Wang; Song Li; Yan Deng; Nongyue He
Journal:  Nano Today       Date:  2021-02-06       Impact factor: 20.722

4.  Programmable endonuclease combined with isothermal polymerase amplification to selectively enrich for rare mutant allele fractions.

Authors:  Junman Chen; Tian Qiud; Michael G Mauk; Zheng Su; Yaguang Fan; Dennis J Yuan; Qinghua Zhou; Youlin Qiao; Haim H Bau; Jianming Ying; Jinzhao Song
Journal:  Chin Chem Lett       Date:  2021-11-26       Impact factor: 8.455

5.  Human-Device Interaction in the Life Science Laboratory.

Authors:  Robert Söldner; Sophia Rheinländer; Tim Meyer; Michael Olszowy; Jonas Austerjost
Journal:  Adv Biochem Eng Biotechnol       Date:  2022       Impact factor: 2.768

6.  3D-printed miniaturized fluidic tools in chemistry and biology.

Authors:  C K Dixit; K Kadimisetty; J Rusling
Journal:  Trends Analyt Chem       Date:  2018-07-05       Impact factor: 12.296

Review 7.  3D Printed Microfluidics.

Authors:  Anna V Nielsen; Michael J Beauchamp; Gregory P Nordin; Adam T Woolley
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2019-12-10       Impact factor: 10.745

8.  Dual-Priming Isothermal Amplification (DAMP) for Highly Sensitive and Specific Molecular Detection with Ultralow Nonspecific Signals.

Authors:  Xiong Ding; Zhiheng Xu; Kun Yin; Maroun Sfeir; Changchun Liu
Journal:  Anal Chem       Date:  2019-09-26       Impact factor: 6.986

9.  A portable, 3D printed, microfluidic device for multiplexed, real time, molecular detection of the porcine epidemic diarrhea virus, transmissible gastroenteritis virus, and porcine deltacoronavirus at the point of need.

Authors:  Mohamed El-Tholoth; Huiwen Bai; Michael G Mauk; Linda Saif; Haim H Bau
Journal:  Lab Chip       Date:  2021-02-02       Impact factor: 6.799

10.  Towards a versatile and economic Chagas Disease point-of-care testing system, by integrating loop-mediated isothermal amplification and contactless/label-free conductivity detection.

Authors:  Federico Figueredo; Fabiana Stolowicz; Adrián Vojnov; Wendell K T Coltro; Luciana Larocca; Carolina Carrillo; Eduardo Cortón
Journal:  PLoS Negl Trop Dis       Date:  2021-05-14
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