Literature DB >> 29536435

Transcriptome Sequencing: RNA-Seq.

Hong Zhang1, Lin He1, Lei Cai2.   

Abstract

RNA sequencing (RNA-seq) can not only be used to identify the expression of common or rare transcripts but also in the identification of other abnormal events, such as alternative splicing, novel transcripts, and fusion genes. In principle, RNA-seq can be carried out by almost all of the next-generation sequencing (NGS) platforms, but the libraries of different platforms are not exactly the same; each platform has its own kit to meet the special requirements of the instrument design.

Keywords:  Data analysis; Library construction; Messenger RNA; Next-generation sequencing; RNA sequencing

Mesh：

Substances：

Year:  2018        PMID： 29536435     DOI： 10.1007/978-1-4939-7717-8_2

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN： 1064-3745


  12 in total

1.  Neohesperidin promotes the osteogenic differentiation of bone mesenchymal stem cells by activating the Wnt/β-catenin signaling pathway.

Authors:  Yue-Wen Chang; Wen-Jun Zhu; Wei Gu; Jun Sun; Zhi-Qiang Li; Xiao-En Wei
Journal:  J Orthop Surg Res       Date:  2021-05-21       Impact factor: 2.359

2.  Comparative Transcriptome Analysis Reveals the Gene Expression and Regulatory Characteristics of Broad-Spectrum Immunity to Leaf Rust in a Wheat-Agropyron cristatum 2P Addition Line.

Authors:  Xiajie Ji; Taiguo Liu; Shirui Xu; Zongyao Wang; Haiming Han; Shenghui Zhou; Baojin Guo; Jinpeng Zhang; Xinming Yang; Xiuquan Li; Lihui Li; Weihua Liu
Journal:  Int J Mol Sci       Date:  2022-07-01       Impact factor: 6.208

3.  A Novel Role of IL13Rα2 in the Pathogenesis of Proliferative Vitreoretinopathy.

Authors:  Hui Qi; Lijun Dong; Dong Fang; Lu Chen; Yun Wang; Ning Fan; Xingxing Mao; Wenyi Wu; Xiaohe Yan; Guoming Zhang; Shaochong Zhang; Hetian Lei
Journal:  Front Med (Lausanne)       Date:  2022-06-13

Review 4.  [Application of RNA sequencing in clinical diagnosis of Mendelian disease].

Authors:  Hui Xiao; Wen-Hao Zhou
Journal:  Zhongguo Dang Dai Er Ke Za Zhi       Date:  2020-10

5.  Comparative Transcriptome and Metabolic Profiling Analysis of Buckwheat (Fagopyrum Tataricum (L.) Gaertn.) under Salinity Stress.

Authors:  Weibo Ma; Jae Kwang Kim; Caihua Jia; Feifan Yin; Hyo Jin Kim; Waheed Akram; Xuebo Hu; Xiaohua Li
Journal:  Metabolites       Date:  2019-10-14

6.  Comparative transcriptome analysis of roots, stems, and leaves of Pueraria lobata (Willd.) Ohwi: identification of genes involved in isoflavonoid biosynthesis.

Authors:  Chenkai Wang; Nenggui Xu; Shuai Cui
Journal:  PeerJ       Date:  2021-02-22       Impact factor: 2.984

7.  Transcriptome profiling reveals the effects of drought tolerance in Giant Juncao.

Authors:  Jing Zhou; Siqi Chen; Wenjiao Shi; Rakefet David-Schwartz; Sutao Li; Fulin Yang; Zhanxi Lin
Journal:  BMC Plant Biol       Date:  2021-01-04       Impact factor: 4.215

8.  Molecular assessment and transcriptome profiling of wild fish populations of Oryzias mekongensis and O. songkhramensis (Adrianichthyidae: Beloniformes) from Thailand.

Authors:  Arin Ngamniyom
Journal:  PLoS One       Date:  2020-11-19       Impact factor: 3.240

9.  De novo assembly and analysis of Polygonatum cyrtonema Hua and identification of genes involved in polysaccharide and saponin biosynthesis.

Authors:  Dandan Li; Qing Wang; Songshu Chen; Hongchang Liu; Keqin Pan; Jinling Li; Chunli Luo; Hualei Wang
Journal:  BMC Genomics       Date:  2022-03-10       Impact factor: 3.969

10.  Transcriptome characterization of Larrea tridentata and identification of genes associated with phenylpropanoid metabolic pathways.

Authors:  Mohammad Ajmal Ali; Fahad Alhemaid; Mohammad Abul Farah; Meena Elangbam; Arun Bahadur Gurung; Khalid Mashay Al-Anazi; Joongku Lee
Journal:  PLoS One       Date:  2022-03-11       Impact factor: 3.240
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.