Literature DB >> 29531179

RAIL: A new tool for defining bacterial promoter regions.

Jyl S Matson1.   

Abstract

In this issue of the Journal of Bacteriology, Hustmyer and colleagues describe a new method for rapidly generating reporter libraries (Hustmyer citation). This RAIL technique (Rapid Arbitrary PCR Insertion Libraries) uses arbitrary PCR and isothermal DNA assembly to insert random fragments of promoter regions into reporter plasmids, resulting in libraries that can be screened to identify regions required for gene expression. This technique will likely be useful for a number of different genetic applications.
Copyright © 2018 American Society for Microbiology.

Year:  2018        PMID: 29531179      PMCID: PMC5952401          DOI: 10.1128/JB.00039-18

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  18 in total

1.  Transcriptome analysis reveals novel regulatory mechanisms in a genome-reduced bacterium.

Authors:  Pavel V Mazin; Gleb Y Fisunov; Alexey Y Gorbachev; Kristina Y Kapitskaya; Ilya A Altukhov; Tatiana A Semashko; Dmitry G Alexeev; Vadim M Govorun
Journal:  Nucleic Acids Res       Date:  2014-10-31       Impact factor: 16.971

Review 2.  The regulation of bacterial transcription initiation.

Authors:  Douglas F Browning; Stephen J Busby
Journal:  Nat Rev Microbiol       Date:  2004-01       Impact factor: 60.633

Review 3.  Molecular biology of bacterial bioluminescence.

Authors:  E A Meighen
Journal:  Microbiol Rev       Date:  1991-03

4.  Structure and evolution of gene regulatory networks in microbial genomes.

Authors:  Sarath Chandra Janga; J Collado-Vides
Journal:  Res Microbiol       Date:  2007-10-15       Impact factor: 3.992

5.  Genome analysis of Escherichia coli promoter sequences evidences that DNA static curvature plays a more important role in gene transcription than has previously been anticipated.

Authors:  N Olivares-Zavaleta; R Jáuregui; E Merino
Journal:  Genomics       Date:  2006-01-18       Impact factor: 5.736

6.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

Review 7.  Escherichia coli promoter sequences: analysis and prediction.

Authors:  G Z Hertz; G D Stormo
Journal:  Methods Enzymol       Date:  1996       Impact factor: 1.600

8.  Fingerprinting genomes using PCR with arbitrary primers.

Authors:  J Welsh; M McClelland
Journal:  Nucleic Acids Res       Date:  1990-12-25       Impact factor: 16.971

9.  Proximal and distal sites bind LuxR independently and activate expression of the Vibrio harveyi lux operon.

Authors:  C M Miyamoto; E E Smith; E Swartzman; J G Cao; A F Graham; E A Meighen
Journal:  Mol Microbiol       Date:  1994-10       Impact factor: 3.501

Review 10.  Fluorescence resonance energy transfer (FRET) microscopy imaging of live cell protein localizations.

Authors:  Rajesh Babu Sekar; Ammasi Periasamy
Journal:  J Cell Biol       Date:  2003-03-03       Impact factor: 10.539

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  1 in total

1.  The 24th Annual Midwest Microbial Pathogenesis Meeting.

Authors:  Patricia A Champion; Joshua D Shrout
Journal:  J Bacteriol       Date:  2018-02-26       Impact factor: 3.490

  1 in total

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