Literature DB >> 8791597

Escherichia coli promoter sequences: analysis and prediction.

G Z Hertz1, G D Stormo.   

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Year:  1996        PMID： 8791597     DOI： 10.1016/s0076-6879(96)73004-5

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN： 0076-6879            Impact factor:   1.600


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  32 in total

1.  Interactions of Escherichia coli RNA with bacteriophage MS2 coat protein: genomic SELEX.

Authors:  T Shtatland; S C Gill; B E Javornik; H E Johansson; B S Singer; O C Uhlenbeck; D A Zichi; L Gold
Journal:  Nucleic Acids Res       Date:  2000-11-01       Impact factor: 16.971

2.  Strong minor groove base conservation in sequence logos implies DNA distortion or base flipping during replication and transcription initiation.

Authors:  T D Schneider
Journal:  Nucleic Acids Res       Date:  2001-12-01       Impact factor: 16.971

Review 3.  Computational approaches to identify promoters and cis-regulatory elements in plant genomes.

Authors:  Stephane Rombauts; Kobe Florquin; Magali Lescot; Kathleen Marchal; Pierre Rouzé; Yves van de Peer
Journal:  Plant Physiol       Date:  2003-07       Impact factor: 8.340

4.  Stress-induced DNA duplex destabilization (SIDD) in the E. coli genome: SIDD sites are closely associated with promoters.

Authors:  Huiquan Wang; Michiel Noordewier; Craig J Benham
Journal:  Genome Res       Date:  2004-08       Impact factor: 9.043

5.  Characterization of Drosophila OVO protein DNA binding specificity using random DNA oligomer selection suggests zinc finger degeneration.

Authors:  S Lee; M D Garfinkel
Journal:  Nucleic Acids Res       Date:  2000-02-01       Impact factor: 16.971

6.  A general procedure for locating and analyzing protein-binding sequence motifs in nucleic acids.

Authors:  M C O'Neill
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-01       Impact factor: 11.205

7.  Predicting strength and function for promoters of the Escherichia coli alternative sigma factor, sigmaE.

Authors:  Virgil A Rhodius; Vivek K Mutalik
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-01       Impact factor: 11.205

8.  Redefining Escherichia coli σ(70) promoter elements: -15 motif as a complement of the -10 motif.

Authors:  Marko Djordjevic
Journal:  J Bacteriol       Date:  2011-09-09       Impact factor: 3.490

9.  Identification of a novel anti-sigmaE factor in Neisseria meningitidis.

Authors:  Carla Th P Hopman; Dave Speijer; Arie van der Ende; Yvonne Pannekoek
Journal:  BMC Microbiol       Date:  2010-06-04       Impact factor: 3.605

10.  Protein-coding gene promoters in Methanocaldococcus (Methanococcus) jannaschii.

Authors:  Jian Zhang; Enhu Li; Gary J Olsen
Journal:  Nucleic Acids Res       Date:  2009-04-09       Impact factor: 16.971
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