Literature DB >> 29527454

In vitro and in silico characterization of a novel dextranase from Pochonia chlamydosporia.

Bruna Leite Sufiate1, Filippe Elias de Freitas Soares1, Samara Silveira Moreira1, Angélica de Souza Gouveia1, Evandro Ferreira Cardoso2, Fabio Ribeiro Braga3, Jackson Victor de Araújo4,5, José Humberto de Queiroz1.   

Abstract

The objective of this study was to purify, characterize, and phylogenetically and structurally analyze the dextranase produced by the fungus Pochonia chlamydosporia. Dextranase produced by the fungus P. chlamydosporia was purified to homogeneity in two steps, with a yield of 152%, purification factor of 6.84 and specific activity of 358.63 U/mg. Its molecular weight was estimated by SDS-PAGE at 64 kDa. The enzyme presented higher activity at 50 °C and pH 5.0, using 100 mM citrate-phosphate buffer, was inhibited by Ag1+, Hg2+, Cu2+, Mg2+, and presented KM of 23.60 µM. Mature dextranase is composed of 585 amino acids residues, with a predicted molecular weight of 64.38 kDa and pI 5.96. This dextranase showed a strong phylogenetic similarity when compared to Trichoderma harzianum dextranase. Its structure consists of two domains: the first composed by 15 β strands, and the second composed by a right-handed parallel β-helix.

Entities:  

Keywords:  3D structure; Enzyme; Purification; Verticillium chlamydosporium

Year:  2018        PMID: 29527454      PMCID: PMC5842162          DOI: 10.1007/s13205-018-1192-4

Source DB:  PubMed          Journal:  3 Biotech        ISSN: 2190-5738            Impact factor:   2.406


  11 in total

1.  In silico characterization of alkaline proteases from different species of Aspergillus.

Authors:  Vivek Kumar Morya; Sangeeta Yadav; Eun-Ki Kim; Dinesh Yadav
Journal:  Appl Biochem Biotechnol       Date:  2011-11-10       Impact factor: 2.926

2.  A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.

Authors:  M M Bradford
Journal:  Anal Biochem       Date:  1976-05-07       Impact factor: 3.365

3.  Studies on dextranase. Purification of dextranase from Penicillium funiculosum and its enzymatic properties.

Authors:  M Sugiura; A Ito; T Ogiso; K Kato; H Asano
Journal:  Biochim Biophys Acta       Date:  1973-06-06

4.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

5.  Purification, characterization, and application of a thermostable dextranase from Talaromyces pinophilus.

Authors:  Yu-Qi Zhang; Ruo-Han Li; Hong-Bin Zhang; Min Wu; Xue-Qin Hu
Journal:  J Ind Microbiol Biotechnol       Date:  2016-12-24       Impact factor: 3.346

Review 6.  Microbial dextran-hydrolyzing enzymes: fundamentals and applications.

Authors:  Elvira Khalikova; Petri Susi; Timo Korpela
Journal:  Microbiol Mol Biol Rev       Date:  2005-06       Impact factor: 11.056

7.  Phage-mediated transfer of a dextranase gene in Lactobacillus sanfranciscensis and characterization of the enzyme.

Authors:  Claudia Picozzi; Daniel Meissner; Margherita Chierici; Matthias A Ehrmann; Ileana Vigentini; Roberto Foschino; Rudi F Vogel
Journal:  Int J Food Microbiol       Date:  2015-02-21       Impact factor: 5.277

8.  Crystal structure of Aspergillus niger isopullulanase, a member of glycoside hydrolase family 49.

Authors:  Masahiro Mizuno; Atsushi Koide; Akihiro Yamamura; Hiromi Akeboshi; Hiromi Yoshida; Shigehiro Kamitori; Yoshiyuki Sakano; Atsushi Nishikawa; Takashi Tonozuka
Journal:  J Mol Biol       Date:  2007-12-05       Impact factor: 5.469

9.  Characterization of a marine-derived dextranase and its application to the prevention of dental caries.

Authors:  Yu-Liang Jiao; Shu-Jun Wang; Ming-Sheng Lv; Bing-Hua Jiao; Wei-Juan Li; Yao-Wei Fang; Shu Liu
Journal:  J Ind Microbiol Biotechnol       Date:  2013-11-07       Impact factor: 3.346

10.  Dextranase from Penicillium minioluteum: reaction course, crystal structure, and product complex.

Authors:  Anna M Larsson; Rolf Andersson; Jerry Ståhlberg; Lennart Kenne; T Alwyn Jones
Journal:  Structure       Date:  2003-09       Impact factor: 5.006

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  3 in total

1.  Colonization and destruction of ants of the genus Camponotus sp. (Hymenoptera: Formicidae) in vitro by the fungus Pochonia chlamydosporia in the southeast region of Brazil.

Authors:  Caio Colodette Senna; Fabio Porto Sena; Jeanne Saraiva da Paz; Abel de Barros Rios; Carolina Magri Ferraz; Dominik Lenz; Filippe Elias Freitas Soares; Fernando Luiz Tobias; Emy Hiura; Jackson Victor de Araújo; Fabio Ribeiro Braga
Journal:  3 Biotech       Date:  2018-07-21       Impact factor: 2.406

2.  Purification, Characterization, and Hydrolysate Analysis of Dextranase From Arthrobacter oxydans G6-4B.

Authors:  Nannan Liu; Peiting Li; Xiujin Dong; Yusi Lan; Linxiang Xu; Zhen Wei; Shujun Wang
Journal:  Front Bioeng Biotechnol       Date:  2022-02-10

Review 3.  Marine Bacterial Dextranases: Fundamentals and Applications.

Authors:  Noora Barzkar; Olga Babich; Rakesh Das; Stanislav Sukhikh; Saeid Tamadoni Jahromi; Muhammad Sohail
Journal:  Molecules       Date:  2022-08-28       Impact factor: 4.927

  3 in total

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