Literature DB >> 29527447

A new regulator of cellulase and xylanase in the thermophilic fungus Myceliophthora thermophila strain ATCC 42464.

Juan Wang1, Yanfen Gong1,2, Shengming Zhao1, Gang Liu1.   

Abstract

Myceliophthora thermophila (ATCC 42464) is a thermophilic fungus that produces cellulolytic enzymes with high thermal stability. Unlike its mesophile counterparts, study on gene expression regulation of cellulolytic enzymes in M. thermophila is inadequate. This work identified the function of MHR1, a putative transcription regulator of cellulolytic enzymes in M. thermophila that was found through RNA-Seq based gene expression profile analysis. RNA interference was used to study the role of MHR1. A recombinant plasmid, pUC19-Ppdc-mhr1-Tpdc, which contained the RNAi sequence for mhr1 was constructed and transformed into M. thermophila. One of the transformants, MtR5, in which the RNA interference efficiency was the highest, was used for the following studies. In the mhr1-silenced strain MtR5, the filter paper hydrolyzing activity was 1.33-fold; β-1, 4-endoglucanase activity was 1.65-fold; and xylanase activity was 1.48-fold higher than those of the parental strain after induction, respectively, by wheat straw powder. qRT-PCR showed that gene expression of cbh1, cbh2, egl3 and xyr1 were 9.56-, 37.36-, 56.14- and 28.30-fold higher in MtR5 than in wild type, respectively. Our findings suggest that the transcription factor MHR1 of M. thermophila can repress cellulase and xylanase activities. Silenced mhr1 results in increased expression not only of the main cellulase genes, but also of the positive regulatory gene xyr1. This work is relevant to the development of M. thermophila as an industrial production host for cellulolytic and hemicellulolytic enzymes, which could be used to degrade a wide range of different biomass, converting lignocellulosic feedstock into sugar precursors for biofuels.

Entities:  

Keywords:  Cellulase; Myceliophthora thermophila; RNAi; Transcription factor; Xylanase

Year:  2018        PMID: 29527447      PMCID: PMC5835483          DOI: 10.1007/s13205-017-1069-y

Source DB:  PubMed          Journal:  3 Biotech        ISSN: 2190-5738            Impact factor:   2.406


  24 in total

Review 1.  Genomics, gene expression and DNA arrays.

Authors:  D J Lockhart; E A Winzeler
Journal:  Nature       Date:  2000-06-15       Impact factor: 49.962

2.  Enhancing xylanase production in the thermophilic fungus Myceliophthora thermophila by homologous overexpression of Mtxyr1.

Authors:  Juan Wang; Yaning Wu; Yanfen Gong; Shaowen Yu; Gang Liu
Journal:  J Ind Microbiol Biotechnol       Date:  2015-07-15       Impact factor: 3.346

3.  Enhancing Cellulase Production in Thermophilic Fungus Myceliophthora thermophila ATCC42464 by RNA Interference of cre1 Gene Expression.

Authors:  Fan Yang; Yanfen Gong; Gang Liu; Shengming Zhao; Juan Wang
Journal:  J Microbiol Biotechnol       Date:  2015-07       Impact factor: 2.351

4.  Deciphering transcriptional regulatory mechanisms associated with hemicellulose degradation in Neurospora crassa.

Authors:  Jianping Sun; Chaoguang Tian; Spencer Diamond; N Louise Glass
Journal:  Eukaryot Cell       Date:  2012-02-17

5.  Data quality aware analysis of differential expression in RNA-seq with NOISeq R/Bioc package.

Authors:  Sonia Tarazona; Pedro Furió-Tarí; David Turrà; Antonio Di Pietro; María José Nueda; Alberto Ferrer; Ana Conesa
Journal:  Nucleic Acids Res       Date:  2015-07-16       Impact factor: 16.971

Review 6.  Regulation of transcription of cellulases- and hemicellulases-encoding genes in Aspergillus niger and Hypocrea jecorina (Trichoderma reesei).

Authors:  Astrid R Stricker; Robert L Mach; Leo H de Graaff
Journal:  Appl Microbiol Biotechnol       Date:  2008-01-16       Impact factor: 4.813

Review 7.  RNA-Seq: a revolutionary tool for transcriptomics.

Authors:  Zhong Wang; Mark Gerstein; Michael Snyder
Journal:  Nat Rev Genet       Date:  2009-01       Impact factor: 53.242

8.  Similar is not the same: differences in the function of the (hemi-)cellulolytic regulator XlnR (Xlr1/Xyr1) in filamentous fungi.

Authors:  Sylvia Klaubauf; Hari Mander Narang; Harm Post; Miaomiao Zhou; Kurt Brunner; Astrid R Mach-Aigner; Robert L Mach; Albert J R Heck; A F Maarten Altelaar; Ronald P de Vries
Journal:  Fungal Genet Biol       Date:  2014-07-23       Impact factor: 3.495

9.  Development of genetic tools for Myceliophthora thermophila.

Authors:  Jing Xu; Jingen Li; Liangcai Lin; Qian Liu; Wenliang Sun; Bangquan Huang; Chaoguang Tian
Journal:  BMC Biotechnol       Date:  2015-05-27       Impact factor: 2.563

10.  Quantitative modeling and analytic assessment of the transcription dynamics of the XlnR regulon in Aspergillus niger.

Authors:  Jimmy Omony; Astrid R Mach-Aigner; Gerrit van Straten; Anton J B van Boxtel
Journal:  BMC Syst Biol       Date:  2016-01-29
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  3 in total

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Authors:  Edimar A Moreira; Thabata M Alvarez; Gabriela F Persinoti; Douglas Antonio Alvaredo Paixão; Letícia R Menezes; João P Franco Cairo; Fabio Marcio Squina; Ana M Costa-Leonardo; Tiago Carrijo; Alberto Arab
Journal:  Curr Microbiol       Date:  2018-09-12       Impact factor: 2.188

Review 2.  Modulating Transcriptional Regulation of Plant Biomass Degrading Enzyme Networks for Rational Design of Industrial Fungal Strains.

Authors:  Ebru Alazi; Arthur F J Ram
Journal:  Front Bioeng Biotechnol       Date:  2018-09-25

3.  Myceliophthora thermophila Xyr1 is predominantly involved in xylan degradation and xylose catabolism.

Authors:  Ana Carolina Dos Santos Gomes; Daniel Falkoski; Evy Battaglia; Mao Peng; Maira Nicolau de Almeida; Nancy Coconi Linares; Jean-Paul Meijnen; Jaap Visser; Ronald P de Vries
Journal:  Biotechnol Biofuels       Date:  2019-09-16       Impact factor: 6.040

  3 in total

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