Literature DB >> 25064064

Similar is not the same: differences in the function of the (hemi-)cellulolytic regulator XlnR (Xlr1/Xyr1) in filamentous fungi.

Sylvia Klaubauf1, Hari Mander Narang2, Harm Post3, Miaomiao Zhou1, Kurt Brunner4, Astrid R Mach-Aigner4, Robert L Mach4, Albert J R Heck3, A F Maarten Altelaar3, Ronald P de Vries5.   

Abstract

The transcriptional activator XlnR (Xlr1/Xyr1) is a major regulator in fungal xylan and cellulose degradation as well as in the utilization of d-xylose via the pentose catabolic pathway. XlnR homologs are commonly found in filamentous ascomycetes and often assumed to have the same function in different fungi. However, a comparison of the saprobe Aspergillus niger and the plant pathogen Magnaporthe oryzae showed different phenotypes for deletion strains of XlnR. In this study wild type and xlnR/xlr1/xyr1 mutants of five fungi were compared: Fusarium graminearum, M. oryzae, Trichoderma reesei, A. niger and Aspergillus nidulans. Growth profiling on relevant substrates and a detailed analysis of the secretome as well as extracellular enzyme activities demonstrated a common role of this regulator in activating genes encoding the main xylanolytic enzymes. However, large differences were found in the set of genes that is controlled by XlnR in the different species, resulting in the production of different extracellular enzyme spectra by these fungi. This comparison emphasizes the functional diversity of a fine-tuned (hemi-)cellulolytic regulatory system in filamentous fungi, which might be related to the adaptation of fungi to their specific biotopes. Data are available via ProteomeXchange with identifier PXD001190.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Aspergillus; Fusarium graminearum; Magnaporthe oryzae; Trichoderma reesei; XlnR; Xylan degradation

Mesh:

Substances:

Year:  2014        PMID: 25064064     DOI: 10.1016/j.fgb.2014.07.007

Source DB:  PubMed          Journal:  Fungal Genet Biol        ISSN: 1087-1845            Impact factor:   3.495


  29 in total

1.  Comparison of the paralogous transcription factors AraR and XlnR in Aspergillus oryzae.

Authors:  Kana Ishikawa; Emi Kunitake; Tomomi Kawase; Motoki Atsumi; Yuji Noguchi; Shuhei Ishikawa; Masahiro Ogawa; Yasuji Koyama; Makoto Kimura; Kyoko Kanamaru; Masashi Kato; Tetsuo Kobayashi
Journal:  Curr Genet       Date:  2018-04-13       Impact factor: 3.886

2.  Enhancing xylanase production in the thermophilic fungus Myceliophthora thermophila by homologous overexpression of Mtxyr1.

Authors:  Juan Wang; Yaning Wu; Yanfen Gong; Shaowen Yu; Gang Liu
Journal:  J Ind Microbiol Biotechnol       Date:  2015-07-15       Impact factor: 3.346

3.  Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.

Authors:  Ronald P de Vries; Robert Riley; Ad Wiebenga; Guillermo Aguilar-Osorio; Sotiris Amillis; Cristiane Akemi Uchima; Gregor Anderluh; Mojtaba Asadollahi; Marion Askin; Kerrie Barry; Evy Battaglia; Özgür Bayram; Tiziano Benocci; Susanna A Braus-Stromeyer; Camila Caldana; David Cánovas; Gustavo C Cerqueira; Fusheng Chen; Wanping Chen; Cindy Choi; Alicia Clum; Renato Augusto Corrêa Dos Santos; André Ricardo de Lima Damásio; George Diallinas; Tamás Emri; Erzsébet Fekete; Michel Flipphi; Susanne Freyberg; Antonia Gallo; Christos Gournas; Rob Habgood; Matthieu Hainaut; María Laura Harispe; Bernard Henrissat; Kristiina S Hildén; Ryan Hope; Abeer Hossain; Eugenia Karabika; Levente Karaffa; Zsolt Karányi; Nada Kraševec; Alan Kuo; Harald Kusch; Kurt LaButti; Ellen L Lagendijk; Alla Lapidus; Anthony Levasseur; Erika Lindquist; Anna Lipzen; Antonio F Logrieco; Andrew MacCabe; Miia R Mäkelä; Iran Malavazi; Petter Melin; Vera Meyer; Natalia Mielnichuk; Márton Miskei; Ákos P Molnár; Giuseppina Mulé; Chew Yee Ngan; Margarita Orejas; Erzsébet Orosz; Jean Paul Ouedraogo; Karin M Overkamp; Hee-Soo Park; Giancarlo Perrone; Francois Piumi; Peter J Punt; Arthur F J Ram; Ana Ramón; Stefan Rauscher; Eric Record; Diego Mauricio Riaño-Pachón; Vincent Robert; Julian Röhrig; Roberto Ruller; Asaf Salamov; Nadhira S Salih; Rob A Samson; Erzsébet Sándor; Manuel Sanguinetti; Tabea Schütze; Kristina Sepčić; Ekaterina Shelest; Gavin Sherlock; Vicky Sophianopoulou; Fabio M Squina; Hui Sun; Antonia Susca; Richard B Todd; Adrian Tsang; Shiela E Unkles; Nathalie van de Wiele; Diana van Rossen-Uffink; Juliana Velasco de Castro Oliveira; Tammi C Vesth; Jaap Visser; Jae-Hyuk Yu; Miaomiao Zhou; Mikael R Andersen; David B Archer; Scott E Baker; Isabelle Benoit; Axel A Brakhage; Gerhard H Braus; Reinhard Fischer; Jens C Frisvad; Gustavo H Goldman; Jos Houbraken; Berl Oakley; István Pócsi; Claudio Scazzocchio; Bernhard Seiboth; Patricia A vanKuyk; Jennifer Wortman; Paul S Dyer; Igor V Grigoriev
Journal:  Genome Biol       Date:  2017-02-14       Impact factor: 13.583

4.  A new regulator of cellulase and xylanase in the thermophilic fungus Myceliophthora thermophila strain ATCC 42464.

Authors:  Juan Wang; Yanfen Gong; Shengming Zhao; Gang Liu
Journal:  3 Biotech       Date:  2018-03-05       Impact factor: 2.406

Review 5.  The Genomes of Three Uneven Siblings: Footprints of the Lifestyles of Three Trichoderma Species.

Authors:  Monika Schmoll; Christoph Dattenböck; Nohemí Carreras-Villaseñor; Artemio Mendoza-Mendoza; Doris Tisch; Mario Ivan Alemán; Scott E Baker; Christopher Brown; Mayte Guadalupe Cervantes-Badillo; José Cetz-Chel; Gema Rosa Cristobal-Mondragon; Luis Delaye; Edgardo Ulises Esquivel-Naranjo; Alexa Frischmann; Jose de Jesus Gallardo-Negrete; Monica García-Esquivel; Elida Yazmin Gomez-Rodriguez; David R Greenwood; Miguel Hernández-Oñate; Joanna S Kruszewska; Robert Lawry; Hector M Mora-Montes; Tania Muñoz-Centeno; Maria Fernanda Nieto-Jacobo; Guillermo Nogueira Lopez; Vianey Olmedo-Monfil; Macario Osorio-Concepcion; Sebastian Piłsyk; Kyle R Pomraning; Aroa Rodriguez-Iglesias; Maria Teresa Rosales-Saavedra; J Alejandro Sánchez-Arreguín; Verena Seidl-Seiboth; Alison Stewart; Edith Elena Uresti-Rivera; Chih-Li Wang; Ting-Fang Wang; Susanne Zeilinger; Sergio Casas-Flores; Alfredo Herrera-Estrella
Journal:  Microbiol Mol Biol Rev       Date:  2016-02-10       Impact factor: 11.056

Review 6.  Conservation and diversity of the regulators of cellulolytic enzyme genes in Ascomycete fungi.

Authors:  Emi Kunitake; Tetsuo Kobayashi
Journal:  Curr Genet       Date:  2017-04-27       Impact factor: 3.886

7.  Profiling multi-enzyme activities of Aspergillus niger strains growing on various agro-industrial residues.

Authors:  Thanaporn Laothanachareon; Benjarat Bunterngsook; Verawat Champreda
Journal:  3 Biotech       Date:  2021-12-14       Impact factor: 2.406

8.  Involvement of Xyr1 and Are1 for Trichodermapepsin Gene Expression in Response to Cellulose and Galactose in Trichoderma reesei.

Authors:  Nayani Dhanushka Daranagama; Yoshiyuki Suzuki; Yosuke Shida; Wataru Ogasawara
Journal:  Curr Microbiol       Date:  2020-04-01       Impact factor: 2.188

9.  Closely related fungi employ diverse enzymatic strategies to degrade plant biomass.

Authors:  Isabelle Benoit; Helena Culleton; Miaomiao Zhou; Marcos DiFalco; Guillermo Aguilar-Osorio; Evy Battaglia; Ourdia Bouzid; Carlo P J M Brouwer; Hala B O El-Bushari; Pedro M Coutinho; Birgit S Gruben; Kristiina S Hildén; Jos Houbraken; Luis Alexis Jiménez Barboza; Anthony Levasseur; Eline Majoor; Miia R Mäkelä; Hari-Mander Narang; Blanca Trejo-Aguilar; Joost van den Brink; Patricia A vanKuyk; Ad Wiebenga; Vincent McKie; Barry McCleary; Adrian Tsang; Bernard Henrissat; Ronald P de Vries
Journal:  Biotechnol Biofuels       Date:  2015-08-01       Impact factor: 6.040

10.  Nucleo-cytoplasmic shuttling dynamics of the transcriptional regulators XYR1 and CRE1 under conditions of cellulase and xylanase gene expression in Trichoderma reesei.

Authors:  Alexander Lichius; Verena Seidl-Seiboth; Bernhard Seiboth; Christian P Kubicek
Journal:  Mol Microbiol       Date:  2014-10-10       Impact factor: 3.501

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