Literature DB >> 29524753

Nature of bonding and cooperativity in linear DMSO clusters: A DFT, AIM and NCI analysis.

Natarajan Sathiyamoorthy Venkataramanan1, Ambigapathy Suvitha2.   

Abstract

This study aims to cast light on the nature of interactions and cooperativity that exists in linear dimethyl sulfoxide (DMSO) clusters using dispersion corrected density functional theory. In the linear DMSO, DMSO molecules in the middle of the clusters are bound strongly than at the terminal. The plot of the total binding energy of the clusters vs the cluster size and mean polarizabilities vs cluster size shows an excellent linearity demonstrating the presence of cooperativity effect. The computed incremental binding energy of the clusters remains nearly constant, implying that DMSO addition at the terminal site can happen to form an infinite chain. In the linear clusters, two σ-hole at the terminal DMSO molecules were found and the value on it was found to increase with the increase in cluster size. The quantum theory of atoms in molecules topography shows the existence of hydrogen and SO⋯S type in linear tetramer and larger clusters. In the dimer and trimer SO⋯OS type of interaction exists. In 2D non-covalent interactions plot, additional peaks in the regions which contribute to the stabilization of the clusters were observed and it splits in the trimer and intensifies in the larger clusters. In the trimer and larger clusters in addition to the blue patches due to hydrogen bonds, additional, light blue patches were seen between the hydrogen atom of the methyl groups and the sulphur atom of the nearby DMSO molecule. Thus, in addition to the strong H-bonds, strong electrostatic interactions between the sulphur atom and methyl hydrogens exists in the linear clusters.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  AIM; Cooperativity; DFT; DMSO; Solvents

Mesh:

Substances:

Year:  2018        PMID: 29524753     DOI: 10.1016/j.jmgm.2018.02.010

Source DB:  PubMed          Journal:  J Mol Graph Model        ISSN: 1093-3263            Impact factor:   2.518


  5 in total

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Journal:  J Mol Model       Date:  2019-02-08       Impact factor: 1.810

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Authors:  Dipankar Roy; Andriy Kovalenko
Journal:  J Comput Aided Mol Des       Date:  2019-10-21       Impact factor: 3.686

3.  Electrochemical sensing behavior of graphdiyne nanoflake towards uric acid: a quantum chemical approach.

Authors:  Misbah Asif; Hasnain Sajid; Khurshid Ayub; Mazhar Amjad Gilani; Mohammed Salim Akhter; Tariq Mahmood
Journal:  J Mol Model       Date:  2021-08-10       Impact factor: 1.810

4.  Microstructural free volume and dynamics of cryoprotective DMSO-water mixtures at low DMSO concentration.

Authors:  Katarína Čechová; Igor Maťko; Jaroslav Rusnák; Helena Švajdlenková; Ivan Klbik; Ján Lakota; Ondrej Šauša
Journal:  RSC Adv       Date:  2019-10-24       Impact factor: 4.036

5.  DL-3-Aminoisobutyric acid: vibrational, NBO and AIM analysis of N-H⋯O bonded-zwitterionic dimer model.

Authors:  Shashikala Yalagi; Jagdish Tonannavar; Jayashree Tonannavar
Journal:  Heliyon       Date:  2019-06-18
  5 in total

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