Literature DB >> 29524134

CRISPR/dCas9 Switch Systems for Temporal Transcriptional Control.

Rutger A F Gjaltema1, Edda G Schulz2.   

Abstract

In a swift revolution, CRISPR/Cas9 has reshaped the means and ease of interrogating biological questions. Particularly, mutants that result in a nuclease-deactivated Cas9 (dCas9) provide scientists with tools to modulate transcription of genomic loci at will by targeting transcriptional effector domains. To interrogate the temporal order of events during transcriptional regulation, rapidly inducible CRISPR/dCas9 systems provide previously unmet molecular tools. In only a few years of time, numerous light and chemical-inducible switches have been applied to CRISPR/dCas9 to generate dCas9 switches. As these inducible switch systems are able to modulate dCas9 directly at the protein level, they rapidly affect dCas9 stability, activity, or target binding and subsequently rapidly influence downstream transcriptional events. Here we review the current state of such biotechnological CRISPR/dCas9 enhancements. Specifically we provide details on their flaws and strengths and on the differences in molecular design between the switch systems. With this we aim to provide a selection guide for researchers with keen interest in rapid temporal control over transcriptional modulation through the CRISPR/dCas9 system.

Keywords:  CRISPR/Cas9; Destabilizing domain; Dimerization domain; ERT; Epigenome editing; Intein; Optogenetics; Split protein; Temporal regulation; Transcriptional modulation

Mesh:

Substances:

Year:  2018        PMID: 29524134     DOI: 10.1007/978-1-4939-7774-1_8

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  6 in total

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Authors:  Marie L Pfeiffer; Joanna Winkler; Daniël Van Damme; Thomas B Jacobs; Moritz K Nowack
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Review 2.  The Roles of Optogenetics and Technology in Neurobiology: A Review.

Authors:  Wenqing Chen; Chen Li; Wanmin Liang; Yunqi Li; Zhuoheng Zou; Yunxuan Xie; Yangzeng Liao; Lin Yu; Qianyi Lin; Meiying Huang; Zesong Li; Xiao Zhu
Journal:  Front Aging Neurosci       Date:  2022-04-19       Impact factor: 5.702

Review 3.  Enlightening the frontiers of neurogastroenterology through optogenetics.

Authors:  Anthony C Johnson; Tijs Louwies; Casey O Ligon; Beverley Greenwood-Van Meerveld
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2020-08-05       Impact factor: 4.052

Review 4.  CRISPR/dCas9 platforms in plants: strategies and applications beyond genome editing.

Authors:  Mahdi Moradpour; Siti Nor Akmar Abdulah
Journal:  Plant Biotechnol J       Date:  2019-09-03       Impact factor: 9.803

5.  Knockdown of LncRNA PANDAR by CRISPR-dCas9 Decreases Proliferation and Increases Apoptosis in Oral Squamous Cell Carcinoma.

Authors:  Tingting Jia; Fengze Wang; Bo Qiao; Yipeng Ren; Lejun Xing; Haizhong Zhang; Hongbo Li
Journal:  Front Mol Biosci       Date:  2021-03-26

6.  Photoactivatable nanoCRISPR/Cas9 System Based on crRNA Reversibly Immobilized on Carbon Nanoparticles.

Authors:  Olga Semikolenova; Lubov Sakovina; Elizaveta Akhmetova; Daria Kim; Ivan Vokhtantsev; Victor Golyshev; Mariya Vorobyeva; Sergey Novopashin; Darya Novopashina
Journal:  Int J Mol Sci       Date:  2021-10-09       Impact factor: 5.923

  6 in total

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