Literature DB >> 29514943

A Newly Identified Flower-Specific Splice Variant of AUXIN RESPONSE FACTOR8 Regulates Stamen Elongation and Endothecium Lignification in Arabidopsis.

Roberta Ghelli1,2, Patrizia Brunetti1,2, Nadia Napoli1,2, Angelo De Paolis3, Valentina Cecchetti1, Tomohiko Tsuge4, Giovanna Serino2, Minami Matsui5, Giovanni Mele6, Gianmarco Rinaldi2, Gianna Aurora Palumbo1, Fabrizio Barozzi7, Paolo Costantino1,2, Maura Cardarelli8.   

Abstract

In addition to the full-length transcript ARF8.1, a splice variant (ARF8.2) of the auxin response factor gene ARF8 has been reported. Here, we identified an intron-retaining variant of ARF8.2, ARF8.4, whose translated product is imported into the nucleus and has tissue-specific localization in Arabidopsis thaliana By inducibly expressing each variant in arf8-7 flowers, we show that ARF8.4 fully complements the short-stamen phenotype of the mutant and restores the expression of AUX/IAA19, encoding a key regulator of stamen elongation. By contrast, the expression of ARF8.2 and ARF8.1 had minor or no effects on arf8-7 stamen elongation and AUX/IAA19 expression. Coexpression of ARF8.2 and ARF8.4 in both the wild type and arf8-7 caused premature anther dehiscence: We show that ARF8.2 is responsible for increased expression of the jasmonic acid biosynthetic gene DAD1 and that ARF8.4 is responsible for premature endothecium lignification due to precocious expression of transcription factor gene MYB26 Finally, we show that ARF8.4 binds to specific auxin-related sequences in both the AUX/IAA19 and MYB26 promoters and activates their transcription more efficiently than ARF8.2. Our data suggest that ARF8.4 is a tissue-specific functional splice variant that controls filament elongation and endothecium lignification by directly regulating key genes involved in these processes.
© 2018 American Society of Plant Biologists. All rights reserved.

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Year:  2018        PMID: 29514943      PMCID: PMC5894849          DOI: 10.1105/tpc.17.00840

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  46 in total

1.  Dimerization and DNA binding of auxin response factors.

Authors:  T Ulmasov; G Hagen; T J Guilfoyle
Journal:  Plant J       Date:  1999-08       Impact factor: 6.417

2.  Contrasting modes of diversification in the Aux/IAA and ARF gene families.

Authors:  David L Remington; Todd J Vision; Thomas J Guilfoyle; Jason W Reed
Journal:  Plant Physiol       Date:  2004-07-09       Impact factor: 8.340

3.  Protein-protein interactions among the Aux/IAA proteins.

Authors:  J Kim; K Harter; A Theologis
Journal:  Proc Natl Acad Sci U S A       Date:  1997-10-28       Impact factor: 11.205

Review 4.  Auxin Response Factors: output control in auxin biology.

Authors:  Mark Roosjen; Sébastien Paque; Dolf Weijers
Journal:  J Exp Bot       Date:  2018-01-04       Impact factor: 6.992

5.  The DEFECTIVE IN ANTHER DEHISCIENCE gene encodes a novel phospholipase A1 catalyzing the initial step of jasmonic acid biosynthesis, which synchronizes pollen maturation, anther dehiscence, and flower opening in Arabidopsis.

Authors:  S Ishiguro; A Kawai-Oda; J Ueda; I Nishida; K Okada
Journal:  Plant Cell       Date:  2001-10       Impact factor: 11.277

6.  Characterization of the last subunit of the Arabidopsis COP9 signalosome: implications for the overall structure and origin of the complex.

Authors:  Giovanna Serino; Hongwen Su; Zhaohua Peng; Tomohiko Tsuge; Ning Wei; Hongya Gu; Xing Wang Deng
Journal:  Plant Cell       Date:  2003-03       Impact factor: 11.277

7.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.

Authors:  S J Clough; A F Bent
Journal:  Plant J       Date:  1998-12       Impact factor: 6.417

8.  The developmental transcriptome of Drosophila melanogaster.

Authors:  Brenton R Graveley; Angela N Brooks; Joseph W Carlson; Michael O Duff; Jane M Landolin; Li Yang; Carlo G Artieri; Marijke J van Baren; Nathan Boley; Benjamin W Booth; James B Brown; Lucy Cherbas; Carrie A Davis; Alex Dobin; Renhua Li; Wei Lin; John H Malone; Nicolas R Mattiuzzo; David Miller; David Sturgill; Brian B Tuch; Chris Zaleski; Dayu Zhang; Marco Blanchette; Sandrine Dudoit; Brian Eads; Richard E Green; Ann Hammonds; Lichun Jiang; Phil Kapranov; Laura Langton; Norbert Perrimon; Jeremy E Sandler; Kenneth H Wan; Aarron Willingham; Yu Zhang; Yi Zou; Justen Andrews; Peter J Bickel; Steven E Brenner; Michael R Brent; Peter Cherbas; Thomas R Gingeras; Roger A Hoskins; Thomas C Kaufman; Brian Oliver; Susan E Celniker
Journal:  Nature       Date:  2010-12-22       Impact factor: 49.962

9.  Enter exitrons.

Authors:  Dorothee Staiger; Gordon G Simpson
Journal:  Genome Biol       Date:  2015-07-07       Impact factor: 13.583

10.  Chromatin immunoprecipitation: optimization, quantitative analysis and data normalization.

Authors:  Max Haring; Sascha Offermann; Tanja Danker; Ina Horst; Christoph Peterhansel; Maike Stam
Journal:  Plant Methods       Date:  2007-09-24       Impact factor: 4.993

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  22 in total

1.  Class-I TCP Transcription Factors Activate the SAUR63 Gene Subfamily in Gibberellin-Dependent Stamen Filament Elongation.

Authors:  Victoria Gastaldi; Leandro E Lucero; Lucía V Ferrero; Federico D Ariel; Daniel H Gonzalez
Journal:  Plant Physiol       Date:  2020-01-27       Impact factor: 8.340

2.  A GARP transcription factor anther dehiscence defected 1 (OsADD1) regulates rice anther dehiscence.

Authors:  Yanjia Xiao; Shimin You; Weiyi Kong; Qianying Tang; Wenting Bai; Yue Cai; Hai Zheng; Chaolong Wang; Ling Jiang; Chunming Wang; Zhigang Zhao; Jianmin Wan
Journal:  Plant Mol Biol       Date:  2019-08-16       Impact factor: 4.076

3.  Alternative splicing of DSP1 enhances snRNA accumulation by promoting transcription termination and recycle of the processing complex.

Authors:  Weili Wang; Xuepiao Pu; Siyu Yang; Yujie Feng; Chan Lin; Mu Li; Xi Li; Huali Li; Chunmei Meng; Qingjun Xie; Bin Yu; Yunfeng Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-03       Impact factor: 11.205

4.  Fresh as an Exitron: A Flower-Specific Splice Variant of AUXIN RESPONSE FACTOR8 Helps Shape the Stamen.

Authors:  Jennifer Lockhart
Journal:  Plant Cell       Date:  2018-03-12       Impact factor: 11.277

5.  AUXIN RESPONSE FACTOR17 Directly Regulates MYB108 for Anther Dehiscence.

Authors:  Xiao-Feng Xu; Bo Wang; Yi-Feng Feng; Jing-Shi Xue; Xue-Xue Qian; Si-Qi Liu; Jie Zhou; Ya-Hui Yu; Nai-Yin Yang; Ping Xu; Zhong-Nan Yang
Journal:  Plant Physiol       Date:  2019-07-25       Impact factor: 8.340

6.  ARF2 positively regulates flavonols and proanthocyanidins biosynthesis in Arabidopsis thaliana.

Authors:  Wenbo Jiang; Yaying Xia; Xiaojia Su; Yongzhen Pang
Journal:  Planta       Date:  2022-07-20       Impact factor: 4.540

7.  Integrated omics analysis identified genes and their splice variants involved in fruit development and metabolites production in Capsicum species.

Authors:  Abdul Rawoof; Ilyas Ahmad; Khushbu Islam; John Momo; Ajay Kumar; Vandana Jaiswal; Nirala Ramchiary
Journal:  Funct Integr Genomics       Date:  2022-09-29       Impact factor: 3.674

8.  Genome-Wide Identification of Auxin Response Factors in Peanut (Arachis hypogaea L.) and Functional Analysis in Root Morphology.

Authors:  Lu Luo; Qian Wan; Zipeng Yu; Kun Zhang; Xiurong Zhang; Suqing Zhu; Yongshan Wan; Zhaojun Ding; Fengzhen Liu
Journal:  Int J Mol Sci       Date:  2022-05-10       Impact factor: 6.208

Review 9.  It's Morphin' time: how multiple signals converge on ARF transcription factors to direct development.

Authors:  Amy Lanctot; Jennifer L Nemhauser
Journal:  Curr Opin Plant Biol       Date:  2020-05-29       Impact factor: 7.834

10.  Normal, novel or none: versatile regulation from alternative splicing.

Authors:  Lei Liu; Ziwei Tang; Fuxia Liu; Feng Mao; Gu Yujuan; Zhijuan Wang; Xiangxiang Zhao
Journal:  Plant Signal Behav       Date:  2021-04-22
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