| Literature DB >> 29510513 |
Marta Trevisan1, Veronica Di Antonio2, Annalisa Radeghieri3, Giorgio Palù4, Reena Ghildyal5, Gualtiero Alvisi6.
Abstract
Respiratory syncytial virus (Entities:
Keywords: Bioluminescence resonance energy transfer (BRET); RSV M protein; confocal microscopy; virus assembly
Mesh:
Substances:
Year: 2018 PMID: 29510513 PMCID: PMC5869502 DOI: 10.3390/v10030109
Source DB: PubMed Journal: Viruses ISSN: 1999-4915 Impact factor: 5.048
Figure 1M deletion mutants used in this study (A) Schematic representation of R espiratory syncytial virus (RSV) matrix (M) deletion mutants used in this study as fused to either YFP, RLuc and cyan fluorescent protein (CFP). Elements involved in dimerization are shown, based on the nomenclature used in [26]. L1, loop 1 (aas 63–88); H2, helix 2 and downstream loop (aas 92–105); H3, helix 3 (aas 129–134); S4, sheet 4 (aas 144–163); L5, loop 5 (225–235); NLS/DBD, nuclear localization sequence/DNA binding domain (residues 110–183); NES, nuclear export sequence (aas 194–206); YFP, yellow fluorescent protein; RLuc, Renilla luciferase; (B) The recently solved M dimeric structure (PDB code 4V23) was used to highlight the key aas involved in M dimerization and their position relative to each deletion mutant tested in this study, using software Chimera as described in the Materials and Methods section. The surface of a full-length M monomer (1–256) is shown as a grey structure in combination with the M versions used in this study, shown as red ribbons. Key residues involved in dimerization in the latter subunit are shown in green. Residue labels are shown either in white or green, depending on their presence or absence in the corresponding deletion mutant, respectively.
Figure 2Deletion of N- and C-terminal portions of RSV M affects protein subcellular localization. (A) HEK293 A cells were transfected to transiently express the indicated YFP-M fusions. 24 h post transfection cell nuclei were stained with DRAQ5, and samples processed for confocal laser scanning microscopy (CSLM) analysis. Representative images relative to cell nuclei (DRAQ5) and M fusions (YFP-M) are shown on the left and middle panels, respectively. Merged images of the two channels are shown in the right panels. Scale bars represent 20 μM. (B) Digital images such as those shown in (A) were quantitatively analyzed using software ImageJ to calculate the Fn/c ratio relative to each fusion protein, as described in Material and Method section. The mean ± SD relative to at least 75 cells from 2 independent experiments is shown. The dotted line represents Fn/c of 1, corresponding to an even distribution between the nucleus and the cytoplasm.
Figure 3Deletion of N- and C-terminal portions of RSV M affects protein ability to colocalize with full-length protein. (A) HEK293 A cells were transfected to transiently express the CFP-M (1–256) fusion protein either in the absence or in the presence of the indicated YFP-M fusions. 24 h post transfection cell nuclei were stained with DRAQ5 and cells processed for CSLM analysis. Representative images relative to cell nuclei (DRAQ5), CFP (CFP-M) and YFP-RSV M fusions (YFP-M) are shown, along with merged images of the three channels (merge). A RGB profile plot relative to the section highlighted in the merge channel is shown on the right panels; (B) Digital images such as those shown in (A) were quantitatively analyzed using software ImageJ to calculate the Fn/c ratio relative to each of the indicated YFP fusion protein, either expressed alone (black columns) or in the presence of CFP-M (1–256) (white columns). n ≥ 63 from at least two independent experiments; (C) Digital images such as those shown in (A) were quantitatively analyzed using software ImageJ to calculate the Fn/c ratio relative to CFP-M (1–256), either expressed alone (black columns) or in the presence of (white columns) of each of the indicated YFP fusion protein. Red dots indicate the Fn/c ratio relative to the indicated YFP-M fusions. n ≥ 63 from at least two independent experiments; (D) Images such as those shown in (A) were used to calculate the Pearson’s coefficient relative to each protein pair. n ≥ 19 from at least two independent experiments. Scale bars represent 20 μM.
Figure 4RSV M can self-interact in live Mammalian cells, depending on its N and C-terminal domains. (A) HEK293T cells were transfected to transiently express the RLuc-M (1–256) plasmid (0.5 ng) either in the absence or in the presence of increasing amounts the YFP-M (1–256) plasmid (range 0–450 ng). Alternatively, cells were transfected with the positive control plasmid RLuc-YFP (225 ng) or with plasmid RLuc-M (1–256) and pCMVFLAG-X-YFP as negative controls. 48 h later cells were processed for BRET measurements as described in the Materials and Methods section. The BRET ratio relative to the RLuc-M (1–256) and the YFP-M (1–256) BRET pair was plotted against the normalized YFPNet/RLuc ratio, and data used to calculate the Bmax and B50. The red dotted line indicates the BRET ratio obtained for the RLuc-YFP control protein, and the blue dotted line indicates the BRET ratio obtained for the RLuc-M (1–256) protein expressed in the presence of YFP alone. Representative data from four independent experiments are shown; (B) HEK293T cells were transfected to transiently express the RLuc-M expression plasmids either alone or in the presence of the indicated YFP-M expression plasmids. 48 h later cells were processed for BRET measurements as described in the Materials and Methods section. The BRET ratio relative to each condition is shown. Representative data from two independent experiments are shown.