Literature DB >> 27464270

Consensus QSAR Related to Global or MOA Models: Application to Acute Toxicity for Fish.

Sylvain Lozano1, Marie-Pierre Halm-Lemeille1, Alban Lepailleur1, Sylvain Rault1, Ronan Bureau2.   

Abstract

Under REACH legislation, alternative methods (in silico or in vitro) like QSAR (Quantitative Structure-Activity Relationships) models are expected to play a significant role. QSARs are based on the assumption that substances with similar chemical structures may have the same biological activities. However, identification of chemical classes could be problematic because chemicals often exhibit different chemical moieties, thereby confounding efforts to achieve a meaningful classification. This publication is focus on the notion of global model with the integration of a recent genetic algorithm for the generation of QSAR models. Starting from three datasets (EPAFHM, ECBHPV, AQUIRE), prediction of acute toxicity for fish (Pimephales promelas) with a global consensus model was carried out leading to very interesting statistics. The integration of the notion of Mode of Action was the second point of this study. A Bayesian classification associated to the genetic algorithm for consensus models was created leading to a good estimation of toxicity associated to derivatives with nonspecific MOA.
Copyright © 2010 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Bayesian classification; Ecotoxicity; Genetic algorithm; Mode of action; QSAR

Year:  2010        PMID: 27464270     DOI: 10.1002/minf.201000104

Source DB:  PubMed          Journal:  Mol Inform        ISSN: 1868-1743            Impact factor:   3.353


  4 in total

1.  Molecular Requirements for Self-Interaction of the Respiratory Syncytial Virus Matrix Protein in Living Mammalian Cells.

Authors:  Marta Trevisan; Veronica Di Antonio; Annalisa Radeghieri; Giorgio Palù; Reena Ghildyal; Gualtiero Alvisi
Journal:  Viruses       Date:  2018-03-03       Impact factor: 5.048

2.  A joint optimization QSAR model of fathead minnow acute toxicity based on a radial basis function neural network and its consensus modeling.

Authors:  Yukun Wang; Xuebo Chen
Journal:  RSC Adv       Date:  2020-06-04       Impact factor: 4.036

3.  Machine learning-based prediction of toxicity of organic compounds towards fathead minnow.

Authors:  Xingmei Chen; Limin Dang; Hai Yang; Xianwei Huang; Xinliang Yu
Journal:  RSC Adv       Date:  2020-10-01       Impact factor: 4.036

Review 4.  The Effect of Artemisinin-Based Drugs vs Non-artemisinin-based Drugs on Gametophyte Carrying in the Body After the Treatment of Uncomplicated Falciparum Malaria: A Systematic Review and Meta-analysis.

Authors:  Yuanyuan Zou; Nadia Julie; Shiyuan Guo; Yexiao Tang; Hongying Zhang; Zhiyong Xu; Wanting Wu; Yueming Yuan; Zhibin Wu; Wenfeng Guo; Changqing Li; Xinan Huang; Qin Xu; Changsheng Deng; Jianping Song; Qi Wang
Journal:  Front Pharmacol       Date:  2022-01-06       Impact factor: 5.810

  4 in total

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