Literature DB >> 29505726

Methods of Measuring Enzyme Activity Ex Vivo and In Vivo.

Yangguang Ou, Rachael E Wilson1, Stephen G Weber1.   

Abstract

Enzymes catalyze a variety of biochemical reactions in the body and, in conjunction with transporters and receptors, control virtually all physiological processes. There is great value in measuring enzyme activity ex vivo and in vivo. Spatial and temporal differences or changes in enzyme activity can be related to a variety of natural and pathological processes. Several analytical approaches have been developed to meet this need. They can be classified broadly as methods either based on artificial substpan class="Species">rates, with the goal of creating images of diseased tissue, or based on natural substpan class="Species">rates, with the goal of understanding natural processes. This review covers a selection of these methods, including optical, magnetic resonance, mass spectrometry, and physical sampling approaches, with a focus on creative chemistry and method development that make ex vivo and in vivo measurements of enzyme activity possible.

Entities:  

Keywords:  MALDI mass spectrometry imaging; electroosmotic push-pull perfusion; electroosmotic sampling; fluorogenic; magnetic resonance; microdialysis

Mesh:

Substances:

Year:  2018        PMID: 29505726      PMCID: PMC6147230          DOI: 10.1146/annurev-anchem-061417-125619

Source DB:  PubMed          Journal:  Annu Rev Anal Chem (Palo Alto Calif)        ISSN: 1936-1327            Impact factor:   10.745


  109 in total

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Authors:  H Zhang; M Stoeckli; P E Andren; R M Caprioli
Journal:  J Mass Spectrom       Date:  1999-04       Impact factor: 1.982

2.  Evaluation of non-formalin tissue fixation for molecular profiling studies.

Authors:  John W Gillespie; Carolyn J M Best; Verena E Bichsel; Kristina A Cole; Susan F Greenhut; Stephen M Hewitt; Mamoun Ahram; Yvonne B Gathright; Maria J Merino; Robert L Strausberg; Jonathan I Epstein; Stanley R Hamilton; Gallya Gannot; Galina V Baibakova; Valerie S Calvert; Michael J Flaig; Rodrigo F Chuaqui; Judi C Herring; John Pfeifer; Emmanuel F Petricoin; W Marston Linehan; Paul H Duray; G Steven Bova; Michael R Emmert-Buck
Journal:  Am J Pathol       Date:  2002-02       Impact factor: 4.307

3.  Creatine kinase, a magnetic resonance-detectable marker gene for quantification of liver-directed gene transfer.

Authors:  Zijun Li; Hui Qiao; Corinna Lebherz; Seok Rye Choi; Xiangyang Zhou; Guanping Gao; Hank F Kung; Daniel J Rader; James M Wilson; Jerry D Glickson; Rong Zhou
Journal:  Hum Gene Ther       Date:  2005-12       Impact factor: 5.695

4.  Real-Time Tracking and In Vivo Visualization of β-Galactosidase Activity in Colorectal Tumor with a Ratiometric Near-Infrared Fluorescent Probe.

Authors:  Kaizhi Gu; Yisheng Xu; Hui Li; Zhiqian Guo; Shaojia Zhu; Shiqin Zhu; Ping Shi; Tony D James; He Tian; Wei-Hong Zhu
Journal:  J Am Chem Soc       Date:  2016-04-15       Impact factor: 15.419

5.  Explicit analytic approximations for time-dependent solutions of the generalized integrated Michaelis-Menten equation.

Authors:  Marko Goličnik
Journal:  Anal Biochem       Date:  2011-01-15       Impact factor: 3.365

6.  Suppression of glial glutamine release to the extracellular fluid studied in vivo by NMR and microdialysis in hyperammonemic rat brain.

Authors:  Keiko Kanamori; Brian D Ross
Journal:  J Neurochem       Date:  2005-07       Impact factor: 5.372

Review 7.  NMR studies of enzymatic rates in vitro and in vivo by magnetization transfer.

Authors:  J R Alger; R G Shulman
Journal:  Q Rev Biophys       Date:  1984-02       Impact factor: 5.318

8.  Increased in vivo regeneration of cortisol in adipose tissue in human obesity and effects of the 11beta-hydroxysteroid dehydrogenase type 1 inhibitor carbenoxolone.

Authors:  Thekkepat C Sandeep; Ruth Andrew; Natalie Z M Homer; Robert C Andrews; Ken Smith; Brian R Walker
Journal:  Diabetes       Date:  2005-03       Impact factor: 9.461

9.  Magnetic Nanosensors for the Detection of Oligonucleotide Sequences.

Authors:  Lee Josephson; J Manuel Perez; Ralph Weissleder
Journal:  Angew Chem Int Ed Engl       Date:  2001-09-03       Impact factor: 15.336

10.  A guide to the identification of metabolites in NMR-based metabonomics/metabolomics experiments.

Authors:  Anthony C Dona; Michael Kyriakides; Flora Scott; Elizabeth A Shephard; Dorsa Varshavi; Kirill Veselkov; Jeremy R Everett
Journal:  Comput Struct Biotechnol J       Date:  2016-03-09       Impact factor: 7.271

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  10 in total

1.  Photoactivatable Reporter to Perform Multiplexed and Temporally Controlled Measurements of Kinase and Protease Activity in Single Cells.

Authors:  Matthew M Anttila; Brianna M Vickerman; Qunzhao Wang; David S Lawrence; Nancy L Allbritton
Journal:  Anal Chem       Date:  2021-12-04       Impact factor: 6.986

Review 2.  Recent progress in the imaging detection of enzyme activities in vivo.

Authors:  Chunjie Yang; Qian Wang; Wu Ding
Journal:  RSC Adv       Date:  2019-08-13       Impact factor: 4.036

Review 3.  Assessing the range of enzymatic and oxidative tunability for biosensor design.

Authors:  Hattie C Schunk; Derek S Hernandez; Mariah J Austin; Kabir S Dhada; Adrianne M Rosales; Laura J Suggs
Journal:  J Mater Chem B       Date:  2020-04-29       Impact factor: 6.331

4.  Constructing and evaluating caspase-activatable adeno-associated virus vector for gene delivery to the injured heart.

Authors:  Mitchell J Brun; Kefan Song; Byunguk Kang; Cooper Lueck; Weitong Chen; Kaitlyn Thatcher; Erhe Gao; Walter J Koch; Joy Lincoln; Sudarsan Rajan; Junghae Suh
Journal:  J Control Release       Date:  2020-11-04       Impact factor: 9.776

Review 5.  Coumarin-Based Profluorescent and Fluorescent Substrates for Determining Xenobiotic-Metabolizing Enzyme Activities In Vitro.

Authors:  Hannu Raunio; Olli Pentikäinen; Risto O Juvonen
Journal:  Int J Mol Sci       Date:  2020-07-01       Impact factor: 5.923

6.  Reduced α-galactosidase A activity in zebrafish (Danio rerio) mirrors distinct features of Fabry nephropathy phenotype.

Authors:  Hassan O A Elsaid; Jessica Furriol; Maria Blomqvist; Mette Diswall; Sabine Leh; Naouel Gharbi; Jan Haug Anonsen; Janka Babickova; Camilla Tøndel; Einar Svarstad; Hans-Peter Marti; Maximilian Krause
Journal:  Mol Genet Metab Rep       Date:  2022-02-17

7.  Highly Sensitive "Off/On" EPR Probes to Monitor Enzymatic Activity.

Authors:  Sabrina Elkhanoufi; Rachele Stefania; Diego Alberti; Simona Baroni; Silvio Aime; Simonetta Geninatti Crich
Journal:  Chemistry       Date:  2022-03-03       Impact factor: 5.020

8.  Fluorescence-Based Measurements of Membrane-Bound Angiotensin Converting Enzyme 2 Activity Using Xenopus Laevis Oocytes.

Authors:  Luise Fast; Richard Ågren; Hugo Zeberg
Journal:  Biosensors (Basel)       Date:  2022-08-04

Review 9.  Molecular Structure, Binding Affinity, and Biological Activity in the Epigenome.

Authors:  Balázs Zoltán Zsidó; Csaba Hetényi
Journal:  Int J Mol Sci       Date:  2020-06-10       Impact factor: 5.923

10.  Multiplex enzyme activity imaging by MALDI-IMS of substrate library conversions.

Authors:  Oliver Klein; Akvile Haeckel; Ulf Reimer; Grit Nebrich; Eyk Schellenberger
Journal:  Sci Rep       Date:  2020-09-23       Impact factor: 4.379

  10 in total

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