| Literature DB >> 29494616 |
Sahar Almotwaa1, Mohamed Elrobh1, Huda AbdulKarim2, Mohamed Alanazi1, Sooad Aldaihan1, Jilani Shaik3, Maha Arafa4, Arjumand Sultan Warsy5.
Abstract
The transcription factor, heat shock factor 1 (HSF1), influences the expression of heat shock proteins as well as other activities like the induction of tumor suppressor genes, signal transduction pathway, and glucose metabolism. We hypothesized that single nucleotide polymorphisms (SNPs) in HSF1 gene might affect its expression or function which might have an influence on the development of breast cancer. The study group included 242 individuals (146 breast cancer patients and 96 healthy controls). From the cancer patients, genomic DNA was extracted from 96 blood samples and 50 Formalin-Fixed Paraffin Embedded (FFPE) tissues, while from the controls DNA were extracted from blood only. Genotype was carried out for four SNPs in the HSF1 gene (rs78202224, rs35253356, rs4977219 and rs34404564) using Taqman genotyping assay method. The HSF1 expression was investigated using immunohistochemistry on FFPE tissues (cancer tissue and adjacent normal tissue). The SNP rs78202224 (G>T) was significantly associated with increased risk of breast cancer. The combined TT + GT genotype (OR: 6.91; p: 0.035) and the T allele showed high risk (OR: 5.81; p:0.0085) for breast cancer development. The SNP rs34404564 (A>G) had a protective effect against the development of breast cancer. The genotype AG (OR: 0.41; p = 0.0059) and GG+AG (OR: 0.52; p: 0.026) occurred at a significantly lower frequency in the breast cancer patients compared to the frequency in healthy controls. No significant relationship was identified between either rs35253356 (A>G) or rs4977219 (A>C) and breast cancer in Saudi. The HSF1 protein expression was higher in all invasive and in situ breast carcinoma compared to the normal tissue. A stronger positive staining for HSF1 was found in the nucleus compared to the cytoplasm. Our results show that HSF1 gene expression is elevated in breast cancer tissue and two of the studied SNPs correlate significantly with cancer development.Entities:
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Year: 2018 PMID: 29494616 PMCID: PMC5832201 DOI: 10.1371/journal.pone.0193095
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Clinical characteristic of breast cancer patients.
| Variable | Cases (n = 146) (%) |
|---|---|
| Age (years) | |
| Tumor Grade | |
| Estrogen Receptor (ER) | |
| Progesterone Receptor (PR) | |
| HER2 status |
Genotype distributions of four SNPs in HSF1 gene in the Saudi controls and patients according to the Hardy-Weinberg equilibrium (HWE).
| Genotype | Case No. | HWE P-value | Control No. | HWE P-value |
|---|---|---|---|---|
| rs78202224 | ||||
| GG | 136 | <0.001 | 94 | <0.001 |
| GT | 3 | 0 | ||
| TT | 7 | 1 | ||
| rs35253356 | ||||
| GG | 45 | 24 | ||
| AG | 64 | 45 | ||
| AA | 36 | 25 | ||
| rs4977219 | ||||
| AA | 29 | 23 | ||
| AC | 66 | 40 | ||
| CC | 50 | 29 | ||
| rs34404564 | ||||
| AA | 56 | 0.001 | 24 | |
| AG | 40 | 42 | ||
| GG | 47 | 29 | ||
Genotype and allele frequencies of four SNPs in HSF1 gene and association with breast cancer risk.
| Variation | Case No. (%) | Control No. (%) | Breast cancer vs. Control | P-value | ||
|---|---|---|---|---|---|---|
| OR | CI | |||||
| rs78202224 | ||||||
| GG | 136 (93.15) | 94 (98.95) | Ref. | |||
| GT | 3 (2.05) | 0 | 4.85 | 0.25–94.91 | 2.06 | 0.15 |
| TT | 7 (4.79) | 1 (1.05) | 4.83 | 0.58–39.97 | 2.59 | 0.11 |
| Total | 146 | 95 | ||||
| TT+GT | 10 | 1 | 6.91 | 0.87–54.9 | 4.44 | 0.035 |
| G | 275 (94.18) | 188 (98.95) | Ref. | |||
| T | 17 (5.82) | 2 (1.05) | 5.81 | 1.32–25.4 | 6.91 | 0.0085 |
| Total | 292 | 190 | ||||
| rs35253356 | ||||||
| GG | 45 (31.03) | 24 (25.53) | Ref. | |||
| AG | 64 (44.14) | 45 (47.87) | 0.76 | 0.41–1.41 | 0.75 | 0.39 |
| AA | 36 (24.83) | 25 (26.6) | 0.77 | 0.377–1.56 | 0.53 | 0.47 |
| Total | 145 | 94 | ||||
| AA+AG | 100 | 70 | 0.76 | 0.42–1.36 | 0.84 | 0.36 |
| G | 154 (53.1) | 93 (49.47) | Ref. | |||
| A | 136 (46.9) | 95 (50.53) | 0.86 | 0.59–1.24 | 0.6 | 0.44 |
| Total | 290 | 188 | ||||
| rs4977219 | ||||||
| AA | 29 (20) | 23 (25) | Ref. | |||
| AC | 66 (45.52) | 40 (43.48) | 1.31 | 0.67–2.57 | 0.61 | 0.43 |
| CC | 50 (34.48) | 29 (31.52) | 1.37 | 0.67–2.79 | 0.74 | 0.40 |
| Total | 145 | 92 | ||||
| AC+CC | 116 | 69 | 1.33 | 0.71–2.49 | 0.82 | 0.36 |
| A | 124(42.76) | 86 (46.74) | Ref. | |||
| C | 166(57.24) | 98 (53.26) | 1.17 | 0.81–1.7 | 0.72 | 0.39 |
| Total | 290 | 184 | ||||
| rs34404564 | ||||||
| AA | 56 (39.16) | 24 (25.26) | Ref. | |||
| AG | 40 (27.97) | 42 (44.21) | 0.41 | 0.21–0.78 | 7.55 | 0.0059 |
| GG | 47 (32.87) | 29 (30.53) | 0.69 | 0.36–1.35 | 1.16 | 0.28 |
| Total | 143 | 95 | ||||
| GG+AG | 87 | 71 | 0.52 | 0.3–0.93 | 4.94 | 0.026 |
| A | 152 (53.15) | 90 (47.37) | Ref. | |||
| G | 134 (46.85) | 100(52.63) | 0.40 | 0.55–1.15 | 1.53 | 0.22 |
| Total | 286 | 190 | ||||
* Statistically significant at p ≤ 0.05.
Summary table for genotype frequencies and P-value for SNPs in HSF1 gene and association with clinical characteristics.
| SNPs | Variation | Age | Age | HER2 - | HER2+ | ER- | ER+ | PR- | ER+ |
|---|---|---|---|---|---|---|---|---|---|
| P-Value | |||||||||
| rs78202224 | GT | 0.73 | |||||||
| TT | 0.29 | 0.074 | 0.28 | 0.036 | 0.29 | 0.11 | 0.26 | ||
| T allele | 0.21 | 0.0068 | 0.061 | 0.001 | 0.09 | 0.008 | 0.093 | ||
| rs35253356 | AG | 0.39 | 0.61 | 0.16 | 0.94 | 0.92 | 0.23 | 0.42 | 0.72 |
| AA | 0.4 | 0.68 | 0.38 | 0.82 | 0.583 | 0.50 | 0.28 | 0.76 | |
| A allele | 0.375 | 0.67 | 0.32 | 0.81 | 0.58 | 0.46 | 0.26 | 0.75 | |
| rs4977219 | AC | 0.4 | 0.73 | 0.72 | 0.34 | 0.43 | 0.57 | 0.18 | 0.87 |
| CC | 0.12 | 0.84 | 0.4 | 0.58 | 0.669 | 0.35 | 0.24 | 0.66 | |
| C allele | 0.12 | 0.72 | 0.35 | 0.64 | 0.71 | 0.33 | 0.29 | 0.64 | |
| rs34404564 | AG | 0.21 | 0.008 | 0.016 | 0.0178 | 0.08 | 0.005 | 0.14 | 0.003 |
| GG | 0.54 | 0.045 | 0.5 | 0.20 | 0.489 | 0.27 | 0.83 | 0.148 | |
| G allele | 0.64 | 0.023 | 0.47 | 0.14 | 0.457 | 0.20 | 0.88 | 0.08 | |
* Statistically significant at p ≤ 0.05.
Fig 1HSF1 protein expression in breast cancer: (A) normal ductal tissue visualized under a microscope with a digital zoom (micro, 200X), negative immune-staining; (B) normal lobular tissue visualized under a microscope with a digital zoom (micro, 200X), negative immune-staining; (C) ductal carcinoma in situ visualized under a microscope with a digital zoom (micro, 200X), strongly positive immune-staining (+3); (D) lobular carcinoma in situ visualized under a microscope with a digital zoom (micro, 200X), moderately positive immune-staining (+2); (E) invasive ductal carcinoma grade I visualized under a microscope with a digital zoom(micro, 400X), strongly positive immune-staining (+3); (F) invasive lobular carcinoma grade I visualized under a microscope with a digital zoom(micro, 200X), moderately immune-staining (+2); (G) invasive ductal carcinoma grade II visualized under a microscope with a digital zoom (micro, 400X), strongly positive immune-staining (+3); (H) invasive ductal carcinoma grade III between fatty tissue of the breast visualized under a microscope with a digital zoom (micro, 200X), strongly positive immune-staining (+3).
Prevalence of the genotypes of the four studied SNPs in patients with different clinical severity of the disease.
| Clinical severity of Breast cancer | SNPs studied in HSF1 gene | |||||||
|---|---|---|---|---|---|---|---|---|
| rs78202224 | rs35253356 | rs4977219 | rs34404564 | |||||
| Genotype | % | Genotype | % | Genotype | % | Genotype | % | |
| High severity | GG | 83.3 | AA | 33.3 | AA | 16.7 | AA | 50 |
| TT | 16.7 | AG | 50 | AC | 50 | AG | 16.7 | |
| GG | 16.7 | CC | 33.3 | GG | 33.3 | |||
| Intermediate | GG | 77.8 | AA | 44.4 | AA | 33.3 | AA | 55.5 |
| TT | 22.2 | AG | 11.1 | AC | 22.2 | AG | 0 | |
| GG | 44.4 | CC | 44.4 | GG | 44.4 | |||