Literature DB >> 29494239

2-Oxoglutarate-Dependent Oxygenases.

Md Saiful Islam1, Thomas M Leissing1, Rasheduzzaman Chowdhury1, Richard J Hopkinson1,2, Christopher J Schofield1.   

Abstract

2-Oxoglutarate (2OG)-dependent oxygenases (2OGXs) catalyze a remarkably diverse range of oxidative reactions. In animals, these comprise hydroxylations and N-demethylations proceeding via hydroxylation; in plants and microbes, they catalyze a wider range including ring formations, rearrangements, desaturations, and halogenations. The catalytic flexibility of 2OGXs is reflected in their biological functions. After pioneering work identified the roles of 2OGXs in collagen biosynthesis, research revealed they also function in plant and animal development, transcriptional regulation, nucleic acid modification/repair, fatty acid metabolism, and secondary metabolite biosynthesis, including of medicinally important antibiotics. In plants, 2OGXs are important agrochemical targets and catalyze herbicide degradation. Human 2OGXs, particularly those regulating transcription, are current therapeutic targets for anemia and cancer. Here, we give an overview of the biochemistry of 2OGXs, providing examples linking to biological function, and outline how knowledge of their enzymology is being exploited in medicine, agrochemistry, and biocatalysis.

Entities:  

Keywords:  2-oxoglutarate; biosynthesis; demethylation; dioxygenase; epigenetics; hydroxylation; hypoxia; oxygen sensing; oxygenase; α-ketoglutarate

Mesh:

Substances:

Year:  2018        PMID: 29494239     DOI: 10.1146/annurev-biochem-061516-044724

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  105 in total

1.  Characterization of a Citrulline 4-Hydroxylase from Nonribosomal Peptide GE81112 Biosynthesis and Engineering of Its Substrate Specificity for the Chemoenzymatic Synthesis of Enduracididine.

Authors:  Christian R Zwick; Max B Sosa; Hans Renata
Journal:  Angew Chem Int Ed Engl       Date:  2019-11-11       Impact factor: 15.336

2.  α-Amine Desaturation of d-Arginine by the Iron(II)- and 2-(Oxo)glutarate-Dependent l-Arginine 3-Hydroxylase, VioC.

Authors:  Noah P Dunham; Andrew J Mitchell; José M Del Río Pantoja; Carsten Krebs; J Martin Bollinger; Amie K Boal
Journal:  Biochemistry       Date:  2018-11-07       Impact factor: 3.162

3.  Pathway from N-Alkylglycine to Alkylisonitrile Catalyzed by Iron(II) and 2-Oxoglutarate-Dependent Oxygenases.

Authors:  Tzu-Yu Chen; Jinfeng Chen; Yijie Tang; Jiahai Zhou; Yisong Guo; Wei-Chen Chang
Journal:  Angew Chem Int Ed Engl       Date:  2020-03-10       Impact factor: 15.336

Review 4.  Glutarate L-2-hydroxylase (CsiD/GlaH) is an archetype Fe(II)/2-oxoglutarate-dependent dioxygenase.

Authors:  Caitlyn Q Herr; Lee Macomber; Efthalia Kalliri; Robert P Hausinger
Journal:  Adv Protein Chem Struct Biol       Date:  2019-06-10       Impact factor: 3.507

5.  Biochemical and Structural Insights into an Fe(II)/α-Ketoglutarate/O2-Dependent Dioxygenase, Kdo 3-Hydroxylase (KdoO).

Authors:  Sang Hoon Joo; Charles W Pemble; Eun Gyeong Yang; Christian R H Raetz; Hak Suk Chung
Journal:  J Mol Biol       Date:  2018-08-07       Impact factor: 5.469

6.  Cryptic and Stereospecific Hydroxylation, Oxidation, and Reduction in Platensimycin and Platencin Biosynthesis.

Authors:  Liao-Bin Dong; Xiao Zhang; Jeffrey D Rudolf; Ming-Rong Deng; Edward Kalkreuter; Alexis J Cepeda; Hans Renata; Ben Shen
Journal:  J Am Chem Soc       Date:  2019-02-19       Impact factor: 15.419

Review 7.  Nucleocytoplasmic O-glycosylation in protists.

Authors:  Christopher M West; Hyun W Kim
Journal:  Curr Opin Struct Biol       Date:  2019-05-22       Impact factor: 6.809

8.  Nucleobase Modifiers Identify TET Enzymes as Bifunctional DNA Dioxygenases Capable of Direct N-Demethylation.

Authors:  Uday Ghanty; Tong Wang; Rahul M Kohli
Journal:  Angew Chem Int Ed Engl       Date:  2020-05-11       Impact factor: 15.336

9.  Evidence for Modulation of Oxygen Rebound Rate in Control of Outcome by Iron(II)- and 2-Oxoglutarate-Dependent Oxygenases.

Authors:  Juan Pan; Eliott S Wenger; Megan L Matthews; Christopher J Pollock; Minakshi Bhardwaj; Amelia J Kim; Benjamin D Allen; Robert B Grossman; Carsten Krebs; J Martin Bollinger
Journal:  J Am Chem Soc       Date:  2019-09-16       Impact factor: 15.419

10.  Skp1 isoforms are differentially modified by a dual function prolyl 4-hydroxylase/N-acety lglucosaminyltransferase in a plant pathogen.

Authors:  Hanke van der Wel; Elisabet Gas-Pascual; Christopher M West
Journal:  Glycobiology       Date:  2019-09-20       Impact factor: 4.313

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.