Literature DB >> 29493440

Potential Roles for G-Quadruplexes in Mitochondria.

Micol Falabella1, Rafael J Fernandez2, F Brad Johnson2, Brett A Kaufman1.   

Abstract

Some DNA or RNA sequences rich in guanine (G) nucleotides can adopt noncanonical conformations known as G-quadruplexes (G4). In the nuclear genome, G4 motifs have been associated with genome instability and gene expression defects, but they are increasingly recognized to be regulatory structures. Recent studies have revealed that G4 structures can form in the mitochondrial genome (mtDNA) and potential G4 forming sequences are associated with the origin of mtDNA deletions. However, little is known about the regulatory role of G4 structures in mitochondria. In this short review, we will explore the potential for G4 structures to regulate mitochondrial function, based on evidence from the nucleus. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.net.

Entities:  

Keywords:  G-quadruplexes; G4 ligand; mitochondrial gene expression; mitochondrial genome instability; mtDNA; mtDNAzzm321990deletions.; mtDNA depletion

Mesh:

Substances:

Year:  2019        PMID: 29493440      PMCID: PMC6113130          DOI: 10.2174/0929867325666180228165527

Source DB:  PubMed          Journal:  Curr Med Chem        ISSN: 0929-8673            Impact factor:   4.530


  91 in total

1.  Topology variation and loop structural homology in crystal and simulated structures of a bimolecular DNA quadruplex.

Authors:  Pascale Hazel; Gary N Parkinson; Stephen Neidle
Journal:  J Am Chem Soc       Date:  2006-04-26       Impact factor: 15.419

2.  Extension of G-quadruplex DNA by ciliate telomerase.

Authors:  Liana Oganesian; Ian K Moon; Tracy M Bryan; Michael B Jarstfer
Journal:  EMBO J       Date:  2006-03-02       Impact factor: 11.598

3.  Regulation of gene expression by the BLM helicase correlates with the presence of G-quadruplex DNA motifs.

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Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-23       Impact factor: 11.205

4.  G-quadruplexes induce apoptosis in tumor cells.

Authors:  Haiyan Qi; Chao-Po Lin; Xuan Fu; Laurence M Wood; Angela A Liu; Yuan-Chin Tsai; Yongjie Chen; Christopher M Barbieri; Daniel S Pilch; Leroy F Liu
Journal:  Cancer Res       Date:  2006-12-15       Impact factor: 12.701

5.  Sequence and organization of the human mitochondrial genome.

Authors:  S Anderson; A T Bankier; B G Barrell; M H de Bruijn; A R Coulson; J Drouin; I C Eperon; D P Nierlich; B A Roe; F Sanger; P H Schreier; A J Smith; R Staden; I G Young
Journal:  Nature       Date:  1981-04-09       Impact factor: 49.962

6.  The Werner syndrome RECQ helicase targets G4 DNA in human cells to modulate transcription.

Authors:  Weiliang Tang; Ana I Robles; Richard P Beyer; Lucas T Gray; Giang H Nguyen; Junko Oshima; Nancy Maizels; Curtis C Harris; Raymond J Monnat
Journal:  Hum Mol Genet       Date:  2016-03-16       Impact factor: 6.150

7.  Binding of human mitochondrial transcription factor A, an HMG box protein, to a four-way DNA junction.

Authors:  T Ohno; S Umeda; N Hamasaki; D Kang
Journal:  Biochem Biophys Res Commun       Date:  2000-05-10       Impact factor: 3.575

8.  Mitochondrial DNA exhibits resistance to induced point and deletion mutations.

Authors:  William J Valente; Nolan G Ericson; Alexandra S Long; Paul A White; Francesco Marchetti; Jason H Bielas
Journal:  Nucleic Acids Res       Date:  2016-08-22       Impact factor: 16.971

9.  Mitochondrial and nuclear localization of human Pif1 helicase.

Authors:  Kazunobu Futami; Akira Shimamoto; Yasuhiro Furuichi
Journal:  Biol Pharm Bull       Date:  2007-09       Impact factor: 2.233

10.  Detection of G-quadruplex DNA in mammalian cells.

Authors:  Alexander Henderson; Yuliang Wu; Yu Chuan Huang; Elizabeth A Chavez; Jesse Platt; F Brad Johnson; Robert M Brosh; Dipankar Sen; Peter M Lansdorp
Journal:  Nucleic Acids Res       Date:  2013-10-24       Impact factor: 16.971

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  18 in total

Review 1.  Mitochondrial DNA Mutagenesis: Feature of and Biomarker for Environmental Exposures and Aging.

Authors:  Tess C Leuthner; Joel N Meyer
Journal:  Curr Environ Health Rep       Date:  2021-11-11

2.  The FDA-Approved Anthelmintic Pyrvinium Pamoate Inhibits Pancreatic Cancer Cells in Nutrient-Depleted Conditions by Targeting the Mitochondria.

Authors:  Christopher W Schultz; Grace A McCarthy; Teena Nerwal; Avinoam Nevler; James B DuHadaway; Matthew D McCoy; Wei Jiang; Samantha Z Brown; Austin Goetz; Aditi Jain; Valerie S Calvert; Vikalp Vishwakarma; Dezhen Wang; Ranjan Preet; Joel Cassel; Ross Summer; Hoora Shaghaghi; Yves Pommier; Simone A Baechler; Michael J Pishvaian; Talia Golan; Charles J Yeo; Emanuel F Petricoin; George C Prendergast; Joseph Salvino; Pankaj K Singh; Dan A Dixon; Jonathan R Brody
Journal:  Mol Cancer Ther       Date:  2021-08-19       Impact factor: 6.261

Review 3.  Recent advances in RNA structurome.

Authors:  Bingbing Xu; Yanda Zhu; Changchang Cao; Hao Chen; Qiongli Jin; Guangnan Li; Junfeng Ma; Siwy Ling Yang; Jieyu Zhao; Jianghui Zhu; Yiliang Ding; Xianyang Fang; Yongfeng Jin; Chun Kit Kwok; Aiming Ren; Yue Wan; Zhiye Wang; Yuanchao Xue; Huakun Zhang; Qiangfeng Cliff Zhang; Yu Zhou
Journal:  Sci China Life Sci       Date:  2022-06-14       Impact factor: 10.372

4.  G-quadruplex dynamics contribute to regulation of mitochondrial gene expression.

Authors:  M Falabella; J E Kolesar; C Wallace; D de Jesus; L Sun; Y V Taguchi; C Wang; T Wang; I M Xiang; J K Alder; R Maheshan; W Horne; J Turek-Herman; P J Pagano; C M St Croix; N Sondheimer; L A Yatsunyk; F B Johnson; B A Kaufman
Journal:  Sci Rep       Date:  2019-04-03       Impact factor: 4.379

Review 5.  Promise of G-Quadruplex Structure Binding Ligands as Epigenetic Modifiers with Anti-Cancer Effects.

Authors:  Antara Sengupta; Akansha Ganguly; Shantanu Chowdhury
Journal:  Molecules       Date:  2019-02-06       Impact factor: 4.411

6.  The Expression of Human DNA Helicase B Is Affected by G-Quadruplexes in the Promoter.

Authors:  Maroof Khan Zafar; Lindsey Hazeslip; Muhammad Zain Chauhan; Alicia K Byrd
Journal:  Biochemistry       Date:  2020-06-07       Impact factor: 3.162

Review 7.  PRIMPOL ready, set, reprime!

Authors:  Stephanie Tirman; Emily Cybulla; Annabel Quinet; Alice Meroni; Alessandro Vindigni
Journal:  Crit Rev Biochem Mol Biol       Date:  2020-11-12       Impact factor: 8.250

8.  Constrained G4 structures unveil topology specificity of known and new G4 binding proteins.

Authors:  A Pipier; A Devaux; T Lavergne; A Adrait; Y Couté; S Britton; P Calsou; J F Riou; E Defrancq; D Gomez
Journal:  Sci Rep       Date:  2021-06-29       Impact factor: 4.379

9.  Fundamentals of G-quadruplex biology.

Authors:  F Brad Johnson
Journal:  Annu Rep Med Chem       Date:  2020-07-30       Impact factor: 1.059

Review 10.  Detours to Replication: Functions of Specialized DNA Polymerases during Oncogene-induced Replication Stress.

Authors:  Wei-Chung Tsao; Kristin A Eckert
Journal:  Int J Mol Sci       Date:  2018-10-20       Impact factor: 5.923

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