Literature DB >> 29478907

SRPKIN-1: A Covalent SRPK1/2 Inhibitor that Potently Converts VEGF from Pro-angiogenic to Anti-angiogenic Isoform.

John M Hatcher1, Guowei Wu2, Chuyue Zeng3, Jie Zhu4, Fan Meng2, Sherrina Patel5, Wenqiu Wang5, Scott B Ficarro6, Alan L Leggett7, Chelsea E Powell1, Jarrod A Marto6, Kang Zhang5, Jacky Chi Ki Ngo3, Xiang-Dong Fu8, Tinghu Zhang9, Nathanael S Gray10.   

Abstract

The SRPK family of kinases regulates pre-mRNA splicing by phosphorylating serine/arginine (SR)-rich splicing factors, signals splicing control in response to extracellular stimuli, and contributes to tumorigenesis, suggesting that these splicing kinases are potential therapeutic targets. Here, we report the development of the first irreversible SRPK inhibitor, SRPKIN-1, which is also the first kinase inhibitor that forms a covalent bond with a tyrosine phenol group in the ATP-binding pocket. Kinome-wide profiling demonstrates its selectivity for SRPK1/2, and SRPKIN-1 attenuates SR protein phosphorylation at submicromolar concentrations. Vascular endothelial growth factor (VEGF) is a known target for SRPK-regulated splicing and, relative to the first-generation SRPK inhibitor SRPIN340 or small interfering RNA-mediated SRPK knockdown, SRPKIN-1 is more potent in converting the pro-angiogenic VEGF-A165a to the anti-angiogenic VEGF-A165b isoform and in blocking laser-induced neovascularization in a murine retinal model. These findings encourage further development of SRPK inhibitors for treatment of age-related macular degeneration.
Copyright © 2018 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  SRPK1/2; SRPKIN-1; VEGF; alternative splicing; irreversible inhibitor

Mesh:

Substances:

Year:  2018        PMID: 29478907      PMCID: PMC5973797          DOI: 10.1016/j.chembiol.2018.01.013

Source DB:  PubMed          Journal:  Cell Chem Biol        ISSN: 2451-9448            Impact factor:   8.116


  71 in total

1.  SR protein kinase 1 is resilient to inactivation.

Authors:  Jacky Chi Ki Ngo; Justin Gullingsrud; Kayla Giang; Melinda Jean Yeh; Xiang-Dong Fu; Joseph A Adams; J Andrew McCammon; Gourisankar Ghosh
Journal:  Structure       Date:  2007-01       Impact factor: 5.006

2.  Regulation of SR protein phosphorylation and alternative splicing by modulating kinetic interactions of SRPK1 with molecular chaperones.

Authors:  Xiang-Yang Zhong; Jian-Hua Ding; Joseph A Adams; Gourisankar Ghosh; Xiang-Dong Fu
Journal:  Genes Dev       Date:  2009-02-15       Impact factor: 11.361

3.  Identification of a Dual Inhibitor of SRPK1 and CK2 That Attenuates Pathological Angiogenesis of Macular Degeneration in Mice.

Authors:  Satoshi Morooka; Mitsuteru Hoshina; Isao Kii; Takayoshi Okabe; Hirotatsu Kojima; Naoko Inoue; Yukiko Okuno; Masatsugu Denawa; Suguru Yoshida; Junichi Fukuhara; Kensuke Ninomiya; Teikichi Ikura; Toshio Furuya; Tetsuo Nagano; Kousuke Noda; Susumu Ishida; Takamitsu Hosoya; Nobutoshi Ito; Nagahisa Yoshimura; Masatoshi Hagiwara
Journal:  Mol Pharmacol       Date:  2015-05-20       Impact factor: 4.436

4.  Utilization of host SR protein kinases and RNA-splicing machinery during viral replication.

Authors:  Takeshi Fukuhara; Takamitsu Hosoya; Saki Shimizu; Kengo Sumi; Takako Oshiro; Yoshiyuki Yoshinaka; Masaaki Suzuki; Naoki Yamamoto; Leonore A Herzenberg; Leonard A Herzenberg; Masatoshi Hagiwara
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-13       Impact factor: 11.205

Review 5.  Regulation of splicing by SR proteins and SR protein-specific kinases.

Authors:  Zhihong Zhou; Xiang-Dong Fu
Journal:  Chromosoma       Date:  2013-03-24       Impact factor: 4.316

6.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

Review 7.  An overview of small-molecule inhibitors of VEGFR signaling.

Authors:  S Percy Ivy; Jeannette Y Wick; Bennett M Kaufman
Journal:  Nat Rev Clin Oncol       Date:  2009-09-08       Impact factor: 66.675

Review 8.  VEGF-A splicing: the key to anti-angiogenic therapeutics?

Authors:  Steven J Harper; David O Bates
Journal:  Nat Rev Cancer       Date:  2008-10-16       Impact factor: 60.716

9.  Targeting SRPK1 to control VEGF-mediated tumour angiogenesis in metastatic melanoma.

Authors:  M V Gammons; R Lucas; R Dean; S E Coupland; S Oltean; D O Bates
Journal:  Br J Cancer       Date:  2014-07-10       Impact factor: 7.640

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  35 in total

1.  Rationally Designed Covalent BCL6 Inhibitor That Targets a Tyrosine Residue in the Homodimer Interface.

Authors:  Mingxing Teng; Scott B Ficarro; Hojong Yoon; Jianwei Che; Jing Zhou; Eric S Fischer; Jarrod A Marto; Tinghu Zhang; Nathanael S Gray
Journal:  ACS Med Chem Lett       Date:  2020-04-03       Impact factor: 4.345

2.  Initiation of Parental Genome Reprogramming in Fertilized Oocyte by Splicing Kinase SRPK1-Catalyzed Protamine Phosphorylation.

Authors:  Lan-Tao Gou; Do-Hwan Lim; Wubin Ma; Brandon E Aubol; Yajing Hao; Xin Wang; Jun Zhao; Zhengyu Liang; Changwei Shao; Xuan Zhang; Fan Meng; Hairi Li; Xiaorong Zhang; Ruiming Xu; Dangsheng Li; Michael G Rosenfeld; Pamela L Mellon; Joseph A Adams; Mo-Fang Liu; Xiang-Dong Fu
Journal:  Cell       Date:  2020-03-12       Impact factor: 41.582

Review 3.  Recent Advances in Selective and Irreversible Covalent Ligand Development and Validation.

Authors:  Tinghu Zhang; John M Hatcher; Mingxing Teng; Nathanael S Gray; Milka Kostic
Journal:  Cell Chem Biol       Date:  2019-10-17       Impact factor: 8.116

Review 4.  Structure-based design and analysis of SuFEx chemical probes.

Authors:  Lyn H Jones; Jeffery W Kelly
Journal:  RSC Med Chem       Date:  2020-01-06

Review 5.  Biology of the mRNA Splicing Machinery and Its Dysregulation in Cancer Providing Therapeutic Opportunities.

Authors:  Maxime Blijlevens; Jing Li; Victor W van Beusechem
Journal:  Int J Mol Sci       Date:  2021-05-12       Impact factor: 5.923

6.  CRISPR/Cas9-mediated double knockout of SRPK1 and SRPK2 in a nasopharyngeal carcinoma cell line.

Authors:  Pongphol Prattapong; Chawalit Ngernsombat; Sathid Aimjongjun; Tavan Janvilisri
Journal:  Cancer Rep (Hoboken)       Date:  2019-11-27

Review 7.  Roles and mechanisms of alternative splicing in cancer - implications for care.

Authors:  Sophie C Bonnal; Irene López-Oreja; Juan Valcárcel
Journal:  Nat Rev Clin Oncol       Date:  2020-04-17       Impact factor: 66.675

8.  Covalent inhibitors of EGFR family protein kinases induce degradation of human Tribbles 2 (TRIB2) pseudokinase in cancer cells.

Authors:  Daniel M Foulkes; Dominic P Byrne; Wayland Yeung; Safal Shrestha; Fiona P Bailey; Samantha Ferries; Claire E Eyers; Karen Keeshan; Carrow Wells; David H Drewry; William J Zuercher; Natarajan Kannan; Patrick A Eyers
Journal:  Sci Signal       Date:  2018-09-25       Impact factor: 8.192

Review 9.  Targeting mRNA processing as an anticancer strategy.

Authors:  Joana Desterro; Pedro Bak-Gordon; Maria Carmo-Fonseca
Journal:  Nat Rev Drug Discov       Date:  2019-09-25       Impact factor: 84.694

10.  A pan-cancer analysis of alternative splicing of splicing factors in 6904 patients.

Authors:  Rui Cheng; Lixing Xiao; Wenyang Zhou; Xiyun Jin; Zhaochun Xu; Chang Xu; Pingping Wang; Meng Luo; Mengyun Wang; Kexin Ma; Huimin Cao; Yan Huang; Xiaoyu Lin; Fenglan Pang; Yiqun Li; Qinghua Jiang
Journal:  Oncogene       Date:  2021-07-20       Impact factor: 9.867

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