Literature DB >> 29475994

Chromosome Cohesion and Condensation in Xenopus Egg Extracts.

Eulália M L da Silva1, Susannah Rankin2,3.   

Abstract

Chromosome structure in both interphase and M-phase cells is strongly influenced by the action of the cohesin and condensin protein complexes. The cohesin complex tethers the identical copies of each chromosome, called sister chromatids, together following DNA replication and promotes normal interphase chromosome structure and gene expression. In contrast, condensin is active largely in M phase and promotes the compaction of individual chromosomes. The Xenopus egg extract system is uniquely suited to analyze the functions of both complexes. Egg extracts, in which the cell cycle state can be manipulated, contain stockpiles of nuclear proteins (including condensin and cohesin) sufficient for the assembly of thousands of nuclei per microliter. Extract prepared from unfertilized eggs is arrested by the presence of cytostatic factor (CSF) in a state with high levels of M-phase kinase activity, but can be stimulated to enter interphase, in which DNA replication occurs spontaneously. For cohesion assays, demembranated sperm nuclei are incubated in interphase extract, where they undergo rapid and synchronous DNA replication and cohesion establishment through the recruitment of proteins and other factors (e.g., nucleotides) from the extract. Sister chromatid cohesion is assessed by then driving the extract into M phase by the addition of fresh CSF-arrested extract. In contrast, because chromosome condensation occurs spontaneously in M-phase extracts, sperm nuclei are added directly to CSF extracts to assay condensation.
© 2019 Cold Spring Harbor Laboratory Press.

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Year:  2019        PMID: 29475994      PMCID: PMC6571020          DOI: 10.1101/pdb.prot097121

Source DB:  PubMed          Journal:  Cold Spring Harb Protoc        ISSN: 1559-6095


  8 in total

1.  Recruitment of Xenopus Scc2 and cohesin to chromatin requires the pre-replication complex.

Authors:  Tatsuro S Takahashi; Pannyun Yiu; Michael F Chou; Steven Gygi; Johannes C Walter
Journal:  Nat Cell Biol       Date:  2004-09-26       Impact factor: 28.824

2.  Regulated chromosomal DNA replication in the absence of a nucleus.

Authors:  J Walter; L Sun; J Newport
Journal:  Mol Cell       Date:  1998-03       Impact factor: 17.970

3.  Condensins, chromosome condensation protein complexes containing XCAP-C, XCAP-E and a Xenopus homolog of the Drosophila Barren protein.

Authors:  T Hirano; R Kobayashi; M Hirano
Journal:  Cell       Date:  1997-05-16       Impact factor: 41.582

Review 4.  Chromosomal DNA replication in a soluble cell-free system derived from Xenopus eggs.

Authors:  Antonin V Tutter; Johannes C Walter
Journal:  Methods Mol Biol       Date:  2006

5.  A Sister Chromatid Cohesion Assay Using Xenopus Egg Extracts.

Authors:  Keishi Shintomi; Tatsuya Hirano
Journal:  Methods Mol Biol       Date:  2017

6.  The Xenopus chromokinesin Xkid is essential for metaphase chromosome alignment and must be degraded to allow anaphase chromosome movement.

Authors:  H Funabiki; A W Murray
Journal:  Cell       Date:  2000-08-18       Impact factor: 41.582

7.  Identification of Xenopus SMC protein complexes required for sister chromatid cohesion.

Authors:  A Losada; M Hirano; T Hirano
Journal:  Genes Dev       Date:  1998-07-01       Impact factor: 11.361

8.  Preparation and use of Xenopus egg extracts to study DNA replication and chromatin associated proteins.

Authors:  Peter J Gillespie; Agnieszka Gambus; J Julian Blow
Journal:  Methods       Date:  2012-04-19       Impact factor: 3.608

  8 in total
  1 in total

1.  Reconstituting Nuclear and Chromosome Dynamics Using Xenopus Extracts.

Authors:  Susannah Rankin
Journal:  Cold Spring Harb Protoc       Date:  2019-03-01
  1 in total

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