Literature DB >> 29474085

RNA Control by Photoreversible Acylation.

Willem A Velema1, Anna M Kietrys1, Eric T Kool1.   

Abstract

External photocontrol over RNA function has emerged as a useful tool for studying nucleic acid biology. Most current methods rely on fully synthetic nucleic acids with photocaged nucleobases, limiting application to relatively short synthetic RNAs. Here we report a method to gain photocontrol over RNA by postsynthetic acylation of 2'-hydroxyls with photoprotecting groups. One-step introduction of these groups efficiently blocks hybridization, which is restored after light exposure. Polyacylation (termed cloaking) enables control over a hammerhead ribozyme, illustrating optical control of RNA catalytic function. Use of the new approach on a transcribed 237 nt RNA aptamer demonstrates the utility of this method to switch on RNA folding in a cellular context, and underlines the potential for application in biological studies.

Entities:  

Mesh:

Substances:

Year:  2018        PMID: 29474085      PMCID: PMC6486827          DOI: 10.1021/jacs.7b12408

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  14 in total

Review 1.  Metal-Dependent DNAzymes for the Quantitative Detection of Metal Ions in Living Cells: Recent Progress, Current Challenges, and Latest Results on FRET Ratiometric Sensors.

Authors:  Kevin Hwang; Quanbing Mou; Ryan J Lake; Mengyi Xiong; Brandalynn Holland; Yi Lu
Journal:  Inorg Chem       Date:  2019-07-31       Impact factor: 5.165

2.  Simple alkanoyl acylating agents for reversible RNA functionalization and control.

Authors:  Hyun Shin Park; Anna M Kietrys; Eric T Kool
Journal:  Chem Commun (Camb)       Date:  2019-04-25       Impact factor: 6.222

3.  Polyacetate and Polycarbonate RNA: Acylating Reagents and Properties.

Authors:  Maryam Habibian; Willem A Velema; Anna M Kietrys; Yoshiyuki Onishi; Eric T Kool
Journal:  Org Lett       Date:  2019-07-03       Impact factor: 6.005

4.  DNA Tiling Enables Precise Acylation-Based Labeling and Control of mRNA.

Authors:  Lu Xiao; Yong Woong Jun; Eric T Kool
Journal:  Angew Chem Int Ed Engl       Date:  2021-11-16       Impact factor: 15.336

5.  Acylation probing of "generic" RNA libraries reveals critical influence of loop constraints on reactivity.

Authors:  Lu Xiao; Linglan Fang; Eric T Kool
Journal:  Cell Chem Biol       Date:  2022-06-02       Impact factor: 9.039

6.  Conjugation of RNA via 2'-OH acylation: Mechanisms determining nucleotide reactivity.

Authors:  Biswarup Jash; Eric T Kool
Journal:  Chem Commun (Camb)       Date:  2022-03-15       Impact factor: 6.065

7.  Site-Selective RNA Functionalization via DNA-Induced Structure.

Authors:  Lu Xiao; Maryam Habibian; Eric T Kool
Journal:  J Am Chem Soc       Date:  2020-09-14       Impact factor: 15.419

8.  Control of RNA with quinone methide reversible acylating reagents.

Authors:  Hyun Shin Park; Biswarup Jash; Lu Xiao; Yong Woong Jun; Eric T Kool
Journal:  Org Biomol Chem       Date:  2021-10-06       Impact factor: 3.890

9.  Conditional control of RNA-guided nucleic acid cleavage and gene editing.

Authors:  Shao-Ru Wang; Ling-Yu Wu; Hai-Yan Huang; Wei Xiong; Jian Liu; Lai Wei; Ping Yin; Tian Tian; Xiang Zhou
Journal:  Nat Commun       Date:  2020-01-03       Impact factor: 14.919

10.  Postsynthetic On-Column 2' Functionalization of RNA by Convenient Versatile Method.

Authors:  Olga A Krasheninina; Veniamin S Fishman; Alexander A Lomzov; Alexey V Ustinov; Alya G Venyaminova
Journal:  Int J Mol Sci       Date:  2020-07-20       Impact factor: 5.923

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.