Literature DB >> 29472364

Pseudo-DUBs as allosteric activators and molecular scaffolds of protein complexes.

Miriam Walden1, Safi Kani Masandi1, Krzysztof Pawłowski2,3, Elton Zeqiraj4.   

Abstract

The ubiquitin (Ub) proteasome system and Ub signalling networks are crucial to cell biology and disease development. Deubiquitylases (DUBs) control cell signalling by removing mono-Ub and polyubiquitin chains from substrates. DUBs take part in almost all processes that regulate cellular life and are frequently dysregulated in disease. We have catalogued 99 currently known DUBs in the human genome and sequence conservation analyses of catalytic residues suggest that 11 lack enzyme activity and are classed as pseudo-DUBs. These pseudoenzymes play important biological roles by allosterically activating catalytically competent DUBs as well as other active enzymes. Additionally, pseudoenzymes act as assembly scaffolds of macromolecular complexes. We discuss how pseudo-DUBs have lost their catalytic activity, their diverse mechanisms of action and their potential as therapeutic targets. Many known pseudo-DUBs play crucial roles in cell biology and it is likely that unstudied and overlooked pseudo-DUB genes will have equally important functions.
© 2018 The Author(s). Published by Portland Press Limited on behalf of the Biochemical Society.

Entities:  

Keywords:  DUBs; deubiquitylases; pseudo-DUBs; pseudoenzymes; signalling; ubiquitin

Mesh:

Substances:

Year:  2018        PMID: 29472364     DOI: 10.1042/BST20160268

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  12 in total

Review 1.  Deubiquitylating enzymes: potential target in autoimmune diseases.

Authors:  Niraj Parihar; Lokesh Kumar Bhatt
Journal:  Inflammopharmacology       Date:  2021-11-18       Impact factor: 4.473

2.  FAM105A/OTULINL Is a Pseudodeubiquitinase of the OTU-Class that Localizes to the ER Membrane.

Authors:  Derek F Ceccarelli; Sofiia Ivantsiv; Amber Anne Mullin; Etienne Coyaud; Noah Manczyk; Pierre Maisonneuve; Igor Kurinov; Liang Zhao; Chris Go; Anne-Claude Gingras; Brian Raught; Sabine Cordes; Frank Sicheri
Journal:  Structure       Date:  2019-05-02       Impact factor: 5.006

3.  EIF3H Orchestrates Hippo Pathway-Mediated Oncogenesis via Catalytic Control of YAP Stability.

Authors:  Zhuan Zhou; Honghong Zhou; Luca Ponzoni; Aiping Luo; Rui Zhu; Mingjing He; Yi Huang; Kun-Liang Guan; Ivet Bahar; Zhihua Liu; Yong Wan
Journal:  Cancer Res       Date:  2020-04-08       Impact factor: 12.701

Review 4.  Breaking the chains: deubiquitylating enzyme specificity begets function.

Authors:  Michael J Clague; Sylvie Urbé; David Komander
Journal:  Nat Rev Mol Cell Biol       Date:  2019-06       Impact factor: 94.444

5.  The CspC pseudoprotease regulates germination of Clostridioides difficile spores in response to multiple environmental signals.

Authors:  Amy E Rohlfing; Brian E Eckenroth; Emily R Forster; Yuzo Kevorkian; M Lauren Donnelly; Hector Benito de la Puebla; Sylvie Doublié; Aimee Shen
Journal:  PLoS Genet       Date:  2019-07-05       Impact factor: 5.917

Review 6.  Ubiquitin-specific protease 8 (USP8/UBPy): a prototypic multidomain deubiquitinating enzyme with pleiotropic functions.

Authors:  Almut Dufner; Klaus-Peter Knobeloch
Journal:  Biochem Soc Trans       Date:  2019-12-20       Impact factor: 5.407

7.  Metabolic control of BRISC-SHMT2 assembly regulates immune signalling.

Authors:  Miriam Walden; Lei Tian; Rebecca L Ross; Upasana M Sykora; Dominic P Byrne; Emma L Hesketh; Safi K Masandi; Joel Cassel; Rachel George; James R Ault; Farid El Oualid; Krzysztof Pawłowski; Joseph M Salvino; Patrick A Eyers; Neil A Ranson; Francesco Del Galdo; Roger A Greenberg; Elton Zeqiraj
Journal:  Nature       Date:  2019-05-29       Impact factor: 69.504

Review 8.  Molecular Mechanisms of DUBs Regulation in Signaling and Disease.

Authors:  Ying Li; David Reverter
Journal:  Int J Mol Sci       Date:  2021-01-20       Impact factor: 5.923

Review 9.  Deubiquitylases in developmental ubiquitin signaling and congenital diseases.

Authors:  Mohammed A Basar; David B Beck; Achim Werner
Journal:  Cell Death Differ       Date:  2020-12-17       Impact factor: 12.067

Review 10.  Ubiquitin-dependent and -independent functions of OTULIN in cell fate control and beyond.

Authors:  Nadine Weinelt; Sjoerd J L van Wijk
Journal:  Cell Death Differ       Date:  2020-12-07       Impact factor: 12.067

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