| Literature DB >> 29470392 |
Mahrooyeh Hadizadeh1,2, Seiied Mojtaba Mohaddes Ardebili3, Mansoor Salehi4, Chris Young5, Fariborz Mokarian6, James McClellan7, Qin Xu8, Mohammad Kazemi9, Elham Moazam10, Behzad Mahaki11, Maziar Ashrafian Bonab12.
Abstract
Lymphedema is a condition resulting from mutations in various genes essential for lymphatic development and function, which leads to obstruction of the lymphatic system. Secondary lymphedema is a progressive and incurable condition, most often manifesting after surgery for breast cancer. Although its causation appears complex, various lines of evidence indicate that genetic predisposition may play a role. Previous studies show that mutations in connexin 47 are associated with secondary lymphedema. We have tested the hypothesis that connexin 37 gene mutations in humans are associated with secondary lymphedema following breast cancer surgery. A total of 2211 breast cancer patients were screened and tested for reference single nucleotide polymorphisms (SNPs) of the GJA4 gene (gap junction protein alpha 4 gene). The results presented in this paper indicate that two SNPs in the 3' UTR (the three prime untranslated region) of the GJA4 gene are associated with an increased risk of secondary lymphedema in patients undergoing breast cancer treatment. Our results provide evidence of a novel genetic biomarker for assessing the predisposition to secondary lymphedema in human breast cancer patients. Testing for the condition-associated alleles described here could assist and inform treatment and post-operative care plans of breast cancer patients, with potentially positive outcomes for the management of disease progression.Entities:
Keywords: GJA4 gene; breast cancer; connexin 37; secondary lymphedema; single nucleotide polymorphism (SNP)
Year: 2018 PMID: 29470392 PMCID: PMC5874680 DOI: 10.3390/biomedicines6010023
Source DB: PubMed Journal: Biomedicines ISSN: 2227-9059
Primer sequences and amplicon sizes for rs3543 and rs705193 used in High-Resolution Melting (HRM) analysis.
| SNP | Allele | Amplicon Size | Primer |
|---|---|---|---|
| rs3543 | C→T | 182 bp | Forward: 5′ CTGGAGAGGAAGCCGTAGTG 3′ |
| Reverse: 5′ CAACAGAGGGGTCCTGAGAA 3′ | |||
| rs705193 | C→G | 194 bp | Forward: 5′ CTGATCCAGAGGAACCCAGA 3′ |
| Reverse: 5′ TGATGAAAACAAGGCACCAG 3′ |
Comparisons of physiological measurements and tumour measurements between the control and case groups.
| Measurements | Statistics | Significance |
|---|---|---|
| Age (year) | ||
| Height (cm) | U = 1342.5 | |
| Weight (kg) | U = 1150.5 | |
| Body surface area (m2) | U = 1249.0 | |
| Tumour size (cm) | ||
| Control | Median: 5; Lower: 4; Upper 5 * | |
| Case | Median: 5; Lower: 5; Upper 5 ** | |
| No. of lymph nodes removed | ||
| Control | Median: 10; Lower: 8; Upper 12 * | |
| Case | Median: 10; Lower: 9; Upper 10 ** | |
| No. of lymph nodes involved | ||
| Control | Median: 1; Lower: 0; Upper 2 * | |
| Case | Median: 2; Lower: 2; Upper 4 ** |
* The range is the same; ** The distribution is the same.
Effects of age, height, weight, and body surface area on the presence of secondary lymphedema.
| Physiological Parameters | Age (Year) | Height (cm) | Weight (kg) | Body Surface Area | Constant |
|---|---|---|---|---|---|
| β | −0.027 | 0.028 | −0.030 | −0.618 | −0.247 |
| S.E. * | 0.026 | 0.039 | 0.023 | 10.118 | 50.856 |
| Wald ** | 10.034 | 0.533 | 10.593 | 0.306 | 0.002 |
| Sig. | 0.309 | 0.465 | 0.207 | 0.580 | 0.966 |
| Odds ratio Exp (β) | 0.974 | 10.029 | 0.971 | 0.539 | 0.781 |
| 95% CI *** for odds ratio | |||||
| Lower | 0.924 | 0.953 | 0.927 | 0.060 | |
| Upper | 1.025 | 1.110 | 1.017 | 4.820 |
* S.E., the standard error around the coefficient for the constant; ** Wald, the Wald chi-square test; *** CI: Confidence Interval.
Figure 1Differences in the number of lymph nodes invaded by tumour cells between the control and case groups.
Effects of clinical parameters and genotypes assessed on the secondary lymphedema.
| Clinical Parameters and Genotypes | S.E. | Wald | Odds Ratio | 95% CI for Odds Ratio | |||
|---|---|---|---|---|---|---|---|
| Lower | Upper | ||||||
| Surgery Method (MRM) | 1.017 | 0.572 | 3.162 | 0.075 | 2.766 | 0.901 | 8.488 |
| Tumour size (cm) | 0.050 | 0.130 | 0.149 | 0.699 | 1.052 | 0.815 | 1.357 |
| No. of lymph nodes removed | −0.089 | 0.076 | 1.385 | 0.239 | 0.914 | 0.788 | 1.061 |
| No. of lymph nodes involved | 0.150 | 0.099 | 2.277 | 0.131 | 1.162 | 0.956 | 1.411 |
| rs3543 (CC) | −1.570 | 1.037 | 2.296 | 0.130 | 0.208 | 0.027 | 1.586 |
| rs3543 (CT) | −0.351 | 0.637 | 0.304 | 0.582 | 0.704 | 0.202 | 2.454 |
| rs705193 (CC) | −1.025 | 0.931 | 1.212 | 0.271 | 0.359 | 0.058 | 2.226 |
| Constant | 0.275 | 1.316 | 0.044 | 0.835 | 1.316 | ||
Figure 2High-Resolution Melting (HRM) detection of rs3543 genotype: (a) genotype CC, (b) genotype CT, and (c) genotype TT. Curve colors represent different samples.
Figure 3HRM detection of rs705193 genotypes: (a) genotype CC and (b) genotype CG. Curve colors represent different samples.
Cross-tabulation analysis of rs3543 allele frequencies in the case and the control groups.
| Presence of Secondary Lymphedema | rs3543 | Total | |||
|---|---|---|---|---|---|
| CC | CT | TT | |||
| Count | 5 | 31 | 15 | 51 | |
| % within Presence of lymphedema | 9.8% | 60.8% | 29.4% | 100.0% | |
| % within rs3543 | 18.5% | 58.5% | 68.2% | 50.0% | |
| Std. Residual (z) | −2.3 | 0.9 | 1.2 | ||
| Count | 22 | 22 | 7 | 51 | |
| % within Presence of lymphedema | 43.1% | 43.1% | 13.7% | 100.0% | |
| % within rs3543 | 81.5% | 41.5% | 31.8% | 50.0% | |
| Std. Residual (z) | 2.3 | −0.9 | −1.2 | ||
| Count | 27 | 53 | 22 | 102 | |
| % within Presence of lymphedema | 26.5% | 52.0% | 21.6% | 100.0% | |
| % within rs3543 | 100.0% | 100.0% | 100.0% | 100.0% | |
Cross-tabulation analysis of rs705193 allele frequencies in the case and the control groups.
| Presence of Lymphedema | rs705193 | Total | ||
|---|---|---|---|---|
| CC | CG | |||
| Count | 8 | 43 | 51 | |
| % within Presence of lymphedema | 15.7% | 84.3% | 100.0% | |
| % within rs705193 | 24.2% | 62.3% | 50.0% | |
| Std. Residual (z) | −2.1 | 1.4 | ||
| Count | 25 | 26 | 51 | |
| % within Presence of lymphedema | 49.0% | 51.0% | 100.0% | |
| % within rs705193 | 75.8% | 37.7% | 50.0% | |
| Std. Residual (z) | 2.1 | −1.4 | ||
| Count | 33 | 69 | 102 | |
| % within Presence of lymphedema | 32.4% | 67.6% | 100.0% | |
| % within rs705193 | 100.0% | 100.0% | 100.0% | |
Association of rs3543 and rs705193 in the case and the control groups.
| Presence of Lymphedema | rs3543 | Total | |||
|---|---|---|---|---|---|
| CC | CT | TT | |||
| With secondary lymphedema (Case group) | rs705193 CC Count | 5 | 0 | 3 | 8 |
| Std. Residual (z) | 4.8 | −2.2 | 0.4 | ||
| CG Count | 0 | 31 | 12 | 43 | |
| Std. Residual (z) | −2.1 | 1.0 | −0.2 | ||
| Total Count | 5 | 31 | 15 | 51 | |
| Without secondary lymphedema (Control group) | rs705193 CC Count | 21 | 2 | 2 | 25 |
| Std. Residual (z) | 3.1 | −2.7 | −0.8 | ||
| CG Count | 1 | 20 | 5 | 26 | |
| Std. Residual (z) | −3.1 | 2.6 | 0.8 | ||
| Total Count | 22 | 22 | 7 | 51 | |
| Total | rs705193 CC Count | 26 | 2 | 5 | 33 |
| Std. Residual (z) | 5.8 | −3.7 | −0.8 | ||
| CG Count | 1 | 51 | 17 | 69 | |
| Std. Residual (z) | −4.0 | 2.5 | 0.5 | ||
| Total Count | 27 | 53 | 22 | 102 | |