| Literature DB >> 29467790 |
Xia-An Bi1, Yang Wang1, Qing Shu1, Qi Sun1, Qian Xu1.
Abstract
Autism spectrum disorder (ASD) is mainly reflected in the communication and language barriers, difficulties in social communication, and it is a kind of neurological developmental disorder. Most researches have used the machine learning method to classify patients and normal controls, among which support vector machines (SVM) are widely employed. But the classification accuracy of SVM is usually low, due to the usage of a single SVM as classifier. Thus, we used multiple SVMs to classify ASD patients and typical controls (TC). Resting-state functional magnetic resonance imaging (fMRI) data of 46 TC and 61 ASD patients were obtained from the Autism Brain Imaging Data Exchange (ABIDE) database. Only 84 of 107 subjects are utilized in experiments because the translation or rotation of 7 TC and 16 ASD patients has surpassed ±2 mm or ±2°. Then the random SVM cluster was proposed to distinguish TC and ASD. The results show that this method has an excellent classification performance based on all the features. Furthermore, the accuracy based on the optimal feature set could reach to 96.15%. Abnormal brain regions could also be found, such as inferior frontal gyrus (IFG) (orbital and opercula part), hippocampus, and precuneus. It is indicated that the method of random SVM cluster may apply to the auxiliary diagnosis of ASD.Entities:
Keywords: autism spectrum disorder; classification; feature selection; neuroimaging; random support vector machine cluster
Year: 2018 PMID: 29467790 PMCID: PMC5808191 DOI: 10.3389/fgene.2018.00018
Source DB: PubMed Journal: Front Genet ISSN: 1664-8021 Impact factor: 4.599
Basic information of ASD and TC.
| Gender (M/F) | 41/4 | 33/6 | 0.359 |
| Age (years) | 13.4 ± 2.4 | 12.9 ± 1.7 | 0.278 |
ASD, Autism spectrum disorder; TC, typical controls.
Figure 1The overall framework of random SVM cluster.
Figure 2The accuracy of 500 SVMs.
Figure 3The optimal number of base classifiers.
The part of features with higher frequency.
| 7 | PreCG.R-IFGtriang.R, IFGoperc.R-PHG.L, REC.L-SMG.L, ORBsupmed.R-TPOmid.R |
| 6 | OLF.R-HIP.R, INS.L-HIP.R, ORBinf.R-PHG.L, SFGdor.R-LING.L, ORBsup.L-FFG.L, REC.L-SPG.R, ROL.L-SMG.L, SMG.R-PCL.L, HIP.L-CAU.R, ORBsupmed.L-PUT.L, REC.R-HES.L, PCUN.R-MTG.R IFGoperc.R-STG.L, SMA.R-STG.L, ORBsup.L-STG.R |
Figure 4The number of optimal feature sets.
Figure 5The weight of each brain region.
The brain regions with higher weight.
| 15 | IFGoperc.R |
| 13 | PCUN.R |
| 11 | ORBsup.L IOG.L |
| 10 | HIP.R |
| 9 | SFGdor.L SFGdor.R DCG.R PCG.R SMG.L THA.R TPOsup.R TPOmid.R |