Literature DB >> 29467383

Circulating tumor DNA 5-hydroxymethylcytosine as a novel diagnostic biomarker for esophageal cancer.

Xin Tian1,2, Baofa Sun3,4, Chuanyuan Chen3,4, Chunchun Gao3,4, Ji Zhang1,2, Xingyu Lu5,6, Linchen Wang3,4, Xiangnan Li7, Yurong Xing7, Ruijuan Liu1,2, Xiao Han3,4, Zheng Qi7, Xiaojian Zhang1,2, Chuan He8, Dali Han9,10, Yun-Gui Yang11,12, Quancheng Kan13,14.   

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Year:  2018        PMID： 29467383      PMCID： PMC5951904          DOI： 10.1038/s41422-018-0014-x

Source DB:  PubMed          Journal:  Cell Res        ISSN： 1001-0602            Impact factor:   25.617


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  11 in total

1.  A Highly Sensitive and Robust Method for Genome-wide 5hmC Profiling of Rare Cell Populations.

Authors:  Dali Han; Xingyu Lu; Alan H Shih; Ji Nie; Qiancheng You; Meng Michelle Xu; Ari M Melnick; Ross L Levine; Chuan He
Journal:  Mol Cell       Date:  2016-07-28       Impact factor: 17.970

2.  Loss of 5-hydroxymethylcytosine is linked to gene body hypermethylation in kidney cancer.

Authors:  Ke Chen; Jing Zhang; Zhongqiang Guo; Qin Ma; Zhengzheng Xu; Yuanyuan Zhou; Ziying Xu; Zhongwu Li; Yiqiang Liu; Xiongjun Ye; Xuesong Li; Bifeng Yuan; Yuwen Ke; Chuan He; Liqun Zhou; Jiang Liu; Weimin Ci
Journal:  Cell Res       Date:  2015-12-18       Impact factor: 25.617

3.  Predicting the Future Burden of Esophageal Cancer by Histological Subtype: International Trends in Incidence up to 2030.

Authors:  Melina Arnold; Mathieu Laversanne; Linda Morris Brown; Susan S Devesa; Freddie Bray
Journal:  Am J Gastroenterol       Date:  2017-06-06       Impact factor: 10.864

4.  Cancer incidence and mortality worldwide: sources, methods and major patterns in GLOBOCAN 2012.

Authors:  Jacques Ferlay; Isabelle Soerjomataram; Rajesh Dikshit; Sultan Eser; Colin Mathers; Marise Rebelo; Donald Maxwell Parkin; David Forman; Freddie Bray
Journal:  Int J Cancer       Date:  2014-10-09       Impact factor: 7.396

Review 5.  5-hydroxymethylcytosine in cancer: significance in diagnosis and therapy.

Authors:  Aparna Vasanthakumar; Lucy A Godley
Journal:  Cancer Genet       Date:  2015-03-03

6.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.

Authors:  Michael I Love; Wolfgang Huber; Simon Anders
Journal:  Genome Biol       Date:  2014       Impact factor: 13.583

7.  5-Hydroxymethylcytosine signatures in circulating cell-free DNA as diagnostic biomarkers for human cancers.

Authors:  Wenshuai Li; Xu Zhang; Xingyu Lu; Lei You; Yanqun Song; Zhongguang Luo; Jun Zhang; Ji Nie; Wanwei Zheng; Diannan Xu; Yaping Wang; Yuanqiang Dong; Shulin Yu; Jun Hong; Jianping Shi; Hankun Hao; Fen Luo; Luchun Hua; Peng Wang; Xiaoping Qian; Fang Yuan; Lianhuan Wei; Ming Cui; Taiping Zhang; Quan Liao; Menghua Dai; Ziwen Liu; Ge Chen; Katherine Meckel; Sarbani Adhikari; Guifang Jia; Marc B Bissonnette; Xinxiang Zhang; Yupei Zhao; Wei Zhang; Chuan He; Jie Liu
Journal:  Cell Res       Date:  2017-09-19       Impact factor: 25.617

8.  5-Hydroxymethylcytosine signatures in cell-free DNA provide information about tumor types and stages.

Authors:  Chun-Xiao Song; Senlin Yin; Li Ma; Amanda Wheeler; Yu Chen; Yan Zhang; Bin Liu; Junjie Xiong; Weihan Zhang; Jiankun Hu; Zongguang Zhou; Biao Dong; Zhiqi Tian; Stefanie S Jeffrey; Mei-Sze Chua; Samuel So; Weimin Li; Yuquan Wei; Jiajie Diao; Dan Xie; Stephen R Quake
Journal:  Cell Res       Date:  2017-08-18       Impact factor: 25.617

Review 9.  The detective, prognostic, and predictive value of DNA methylation in human esophageal squamous cell carcinoma.

Authors:  Kai Ma; Baoping Cao; Mingzhou Guo
Journal:  Clin Epigenetics       Date:  2016-04-22       Impact factor: 6.551

10.  Esophageal cancer statistics in China, 2011: Estimates based on 177 cancer registries.

Authors:  Hongmei Zeng; Rongshou Zheng; Siwei Zhang; Tingting Zuo; Changfa Xia; Xiaonong Zou; Wanqing Chen
Journal:  Thorac Cancer       Date:  2015-12-07       Impact factor: 3.500
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  32 in total

1.  5-Hydroxymethylcytosine Profiles in Circulating Cell-Free DNA Associate with Disease Burden in Children with Neuroblastoma.

Authors:  Mark A Applebaum; Erin K Barr; Jason Karpus; Diana C West-Szymanski; Meritxell Oliva; Elizabeth A Sokol; Sheng Zhang; Zhou Zhang; Wei Zhang; Alexandre Chlenski; Helen R Salwen; Emma Wilkinson; Marija Dobratic; Robert L Grossman; Lucy A Godley; Barbara E Stranger; Chuan He; Susan L Cohn
Journal:  Clin Cancer Res       Date:  2019-12-18       Impact factor: 12.531

2.  Prognostic implications of 5-hydroxymethylcytosines from circulating cell-free DNA in diffuse large B-cell lymphoma.

Authors:  Brian C-H Chiu; Zhou Zhang; Qiancheng You; Chang Zeng; Elizabeth Stepniak; Paige M Bracci; Kangkang Yu; Girish Venkataraman; Sonali M Smith; Chuan He; Wei Zhang
Journal:  Blood Adv       Date:  2019-10-08

3.  Molecular biology of oral cavity squamous cell carcinoma.

Authors:  Phillip J Hsu; Kenneth Yan; Hailing Shi; Evgeny Izumchenko; Nishant Agrawal
Journal:  Oral Oncol       Date:  2020-01-07       Impact factor: 5.337

4.  CDK11p110 plays a critical role in the tumorigenicity of esophageal squamous cell carcinoma cells and is a potential drug target.

Authors:  Yue Du; Dan Yan; Yongliang Yuan; Jian Xu; Suhua Wang; Zhiheng Yang; Weiyan Cheng; Xin Tian; Quancheng Kan
Journal:  Cell Cycle       Date:  2019-02-12       Impact factor: 4.534

Review 5.  Utility of Perioperative Measurement of Cell-Free DNA and Circulating Tumor DNA in Informing the Prognosis of GI Cancers: A Systematic Review.

Authors:  Phillip J Hsu; Khushboo Singh; Ankit Dhiman; Hunter D D Witmer; Chuan He; Oliver S Eng; Daniel V T Catenacci; Mitchell C Posner; Kiran K Turaga
Journal:  JCO Precis Oncol       Date:  2022-02

6.  Impact of 5HydroxyMethylCytosine (5hmC) on reverse/direct association of cell-cycle, apoptosis, and extracellular matrix pathways in gastrointestinal cancers.

Authors:  Sayyed Sajjad Moravveji; Samane Khoshbakht; Majid Mokhtari; Mahdieh Salimi; Hossein Lanjanian; Sajjad Nematzadeh; Mahsa Torkamanian-Afshar; Ali Masoudi-Nejad
Journal:  BMC Genom Data       Date:  2022-06-29

7.  Bisulfite-Free, Nanoscale Analysis of 5-Hydroxymethylcytosine at Single Base Resolution.

Authors:  Hu Zeng; Bo He; Bo Xia; Dongsheng Bai; Xingyu Lu; Jiabin Cai; Lei Chen; Ankun Zhou; Chenxu Zhu; Haowei Meng; Yun Gao; Hongshan Guo; Chuan He; Qing Dai; Chengqi Yi
Journal:  J Am Chem Soc       Date:  2018-10-04       Impact factor: 15.419

Review 8.  Towards an Organ-Sparing Approach for Locally Advanced Esophageal Cancer.

Authors:  Berend Jan van der Wilk; Ben M Eyck; Manon C W Spaander; Roelf Valkema; Sjoerd M Lagarde; Bas P L Wijnhoven; J Jan B van Lanschot
Journal:  Dig Surg       Date:  2018-09-18       Impact factor: 2.588

9.  Effect of miR-630 expression on esophageal cancer cell invasion and migration.

Authors:  Xi Liu; Wei Wu; Shixin Zhang; Wenfeng Tan; Yang Qiu; Kelong Liao; Kang Yang
Journal:  J Clin Lab Anal       Date:  2021-05-21       Impact factor: 2.352

10.  Downregulation of 5-hydroxymethylcytosine is an early event in pancreatic tumorigenesis.

Authors:  Kohei Fujikura; Zainab I Alruwaii; Michael C Haffner; Maria A Trujillo; Nicholas J Roberts; Seung-Mo Hong; Anne Macgregor-Das; Michael G Goggins; Sujayita Roy; Alan K Meeker; Ding Ding; Michael Wright; Jin He; Ralph H Hruban; Laura D Wood
Journal:  J Pathol       Date:  2021-05-21       Impact factor: 9.883
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