Literature DB >> 25892122

5-hydroxymethylcytosine in cancer: significance in diagnosis and therapy.

Aparna Vasanthakumar1, Lucy A Godley2.   

Abstract

Emerging data have demonstrated that 5-methylcytosine (5-mC) and its oxidized products 5-hydroxymethylcytosine (5-hmC), 5-formylcytosine (5-fC), and 5-carboxylcytosine (5-CaC) play unique roles in several biological processes, including the control of gene expression and in the pathogenesis of cancer. In this review, we focus on 5-hmC and the disruption of its distribution in several cancers, including hematological malignancies and solid tumors. We present an outline of how 5-hmC is closely associated with metabolic pathways and may be the missing link connecting epigenetics with metabolism in the context of cancer cells. Finally, we discuss the diagnostic and prognostic importance of 5-mC and 5-hmC patterning, and how we may be able to establish new paradigms in cancer therapy based on these alterations.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  5-hydroxymethylcytosine; 5-methylcytosine; DNMT; TET

Mesh:

Substances:

Year:  2015        PMID: 25892122     DOI: 10.1016/j.cancergen.2015.02.009

Source DB:  PubMed          Journal:  Cancer Genet


  42 in total

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2.  Circulating tumor DNA 5-hydroxymethylcytosine as a novel diagnostic biomarker for esophageal cancer.

Authors:  Xin Tian; Baofa Sun; Chuanyuan Chen; Chunchun Gao; Ji Zhang; Xingyu Lu; Linchen Wang; Xiangnan Li; Yurong Xing; Ruijuan Liu; Xiao Han; Zheng Qi; Xiaojian Zhang; Chuan He; Dali Han; Yun-Gui Yang; Quancheng Kan
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3.  OxyBS: estimation of 5-methylcytosine and 5-hydroxymethylcytosine from tandem-treated oxidative bisulfite and bisulfite DNA.

Authors:  E Andres Houseman; Kevin C Johnson; Brock C Christensen
Journal:  Bioinformatics       Date:  2016-04-19       Impact factor: 6.937

4.  Impact of 5HydroxyMethylCytosine (5hmC) on reverse/direct association of cell-cycle, apoptosis, and extracellular matrix pathways in gastrointestinal cancers.

Authors:  Sayyed Sajjad Moravveji; Samane Khoshbakht; Majid Mokhtari; Mahdieh Salimi; Hossein Lanjanian; Sajjad Nematzadeh; Mahsa Torkamanian-Afshar; Ali Masoudi-Nejad
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5.  Bisulfite-Free, Nanoscale Analysis of 5-Hydroxymethylcytosine at Single Base Resolution.

Authors:  Hu Zeng; Bo He; Bo Xia; Dongsheng Bai; Xingyu Lu; Jiabin Cai; Lei Chen; Ankun Zhou; Chenxu Zhu; Haowei Meng; Yun Gao; Hongshan Guo; Chuan He; Qing Dai; Chengqi Yi
Journal:  J Am Chem Soc       Date:  2018-10-04       Impact factor: 15.419

6.  Pol β gap filling, DNA ligation and substrate-product channeling during base excision repair opposite oxidized 5-methylcytosine modifications.

Authors:  Melike Çağlayan
Journal:  DNA Repair (Amst)       Date:  2020-08-14

7.  Fumarate and Succinate Regulate Expression of Hypoxia-inducible Genes via TET Enzymes.

Authors:  Tuomas Laukka; Christopher J Mariani; Tuukka Ihantola; John Z Cao; Juho Hokkanen; William G Kaelin; Lucy A Godley; Peppi Koivunen
Journal:  J Biol Chem       Date:  2015-12-23       Impact factor: 5.157

Review 8.  ALS and FTD: an epigenetic perspective.

Authors:  Veronique V Belzil; Rebecca B Katzman; Leonard Petrucelli
Journal:  Acta Neuropathol       Date:  2016-06-09       Impact factor: 17.088

9.  CircMEMO1 modulates the promoter methylation and expression of TCF21 to regulate hepatocellular carcinoma progression and sorafenib treatment sensitivity.

Authors:  Zhao-Ru Dong; Ai-Wu Ke; Tao Li; Jia-Bing Cai; Ya-Fei Yang; Wei Zhou; Guo-Ming Shi; Jia Fan
Journal:  Mol Cancer       Date:  2021-05-13       Impact factor: 27.401

Review 10.  Molecular Epigenetics: Chemical Biology Tools Come of Age.

Authors:  John D Bagert; Tom W Muir
Journal:  Annu Rev Biochem       Date:  2021-06-20       Impact factor: 27.258

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