Literature DB >> 29463899

Silencing of developmental genes by H3K27me3 and DNA methylation reflects the discrepant plasticity of embryonic and extraembryonic lineages.

Xianfa Yang1,2, Boqiang Hu3, Yu Hou3, Yunbo Qiao4,5, Ran Wang1, Yingying Chen1, Yun Qian1, Su Feng1, Jun Chen1,6, Chang Liu1, Guangdun Peng1, Fuchou Tang7,8,9, Naihe Jing10,11.   

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Year:  2018        PMID： 29463899      PMCID： PMC5951795          DOI： 10.1038/s41422-018-0010-1

Source DB:  PubMed          Journal:  Cell Res        ISSN： 1001-0602            Impact factor:   25.617


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  10 in total

1.  Profiling DNA methylome landscapes of mammalian cells with single-cell reduced-representation bisulfite sequencing.

Authors:  Hongshan Guo; Ping Zhu; Fan Guo; Xianlong Li; Xinglong Wu; Xiaoying Fan; Lu Wen; Fuchou Tang
Journal:  Nat Protoc       Date:  2015-04-02       Impact factor: 13.491

2.  A bivalent chromatin structure marks key developmental genes in embryonic stem cells.

Authors:  Bradley E Bernstein; Tarjei S Mikkelsen; Xiaohui Xie; Michael Kamal; Dana J Huebert; James Cuff; Ben Fry; Alex Meissner; Marius Wernig; Kathrin Plath; Rudolf Jaenisch; Alexandre Wagschal; Robert Feil; Stuart L Schreiber; Eric S Lander
Journal:  Cell       Date:  2006-04-21       Impact factor: 41.582

3.  A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters.

Authors:  Serge Saxonov; Paul Berg; Douglas L Brutlag
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-23       Impact factor: 11.205

4.  Distinct features of H3K4me3 and H3K27me3 chromatin domains in pre-implantation embryos.

Authors:  Xiaoyu Liu; Chenfei Wang; Wenqiang Liu; Jingyi Li; Chong Li; Xiaochen Kou; Jiayu Chen; Yanhong Zhao; Haibo Gao; Hong Wang; Yong Zhang; Yawei Gao; Shaorong Gao
Journal:  Nature       Date:  2016-09-14       Impact factor: 49.962

5.  A selective inhibitor of EZH2 blocks H3K27 methylation and kills mutant lymphoma cells.

Authors:  Sarah K Knutson; Tim J Wigle; Natalie M Warholic; Christopher J Sneeringer; Christina J Allain; Christine R Klaus; Joelle D Sacks; Alejandra Raimondi; Christina R Majer; Jeffrey Song; Margaret Porter Scott; Lei Jin; Jesse J Smith; Edward J Olhava; Richard Chesworth; Mikel P Moyer; Victoria M Richon; Robert A Copeland; Heike Keilhack; Roy M Pollock; Kevin W Kuntz
Journal:  Nat Chem Biol       Date:  2012-09-30       Impact factor: 15.040

6.  Spatial Transcriptome for the Molecular Annotation of Lineage Fates and Cell Identity in Mid-gastrula Mouse Embryo.

Authors:  Guangdun Peng; Shengbao Suo; Jun Chen; Weiyang Chen; Chang Liu; Fang Yu; Ran Wang; Shirui Chen; Na Sun; Guizhong Cui; Lu Song; Patrick P L Tam; Jing-Dong J Han; Naihe Jing
Journal:  Dev Cell       Date:  2016-03-21       Impact factor: 12.270

7.  Chromatin dynamics and the role of G9a in gene regulation and enhancer silencing during early mouse development.

Authors:  Jan J Zylicz; Sabine Dietmann; Ufuk Günesdogan; Jamie A Hackett; Delphine Cougot; Caroline Lee; M Azim Surani
Journal:  Elife       Date:  2015-11-09       Impact factor: 8.140

8.  Staging of gastrulating mouse embryos by morphological landmarks in the dissecting microscope.

Authors:  K M Downs; T Davies
Journal:  Development       Date:  1993-08       Impact factor: 6.868

9.  Epigenetic restriction of extraembryonic lineages mirrors the somatic transition to cancer.

Authors:  Zachary D Smith; Jiantao Shi; Hongcang Gu; Julie Donaghey; Kendell Clement; Davide Cacchiarelli; Andreas Gnirke; Franziska Michor; Alexander Meissner
Journal:  Nature       Date:  2017-09-20       Impact factor: 49.962

10.  DNA methylation dynamics of the human preimplantation embryo.

Authors:  Zachary D Smith; Michelle M Chan; Kathryn C Humm; Rahul Karnik; Shila Mekhoubad; Aviv Regev; Kevin Eggan; Alexander Meissner
Journal:  Nature       Date:  2014-07-23       Impact factor: 49.962
  10 in total
  13 in total

Review 1.  Epigenetic reorganization during early embryonic lineage specification.

Authors:  Haitong Fang; Zhuojuan Luo; Chengqi Lin
Journal:  Genes Genomics       Date:  2022-02-08       Impact factor: 1.839

2.  Wholemount in situ Hybridization for Spatial-temporal Visualization of Gene Expression in Early Post-implantation Mouse Embryos.

Authors:  Xianfa Yang; Yingying Chen; Lu Song; Ting Zhang; Naihe Jing
Journal:  Bio Protoc       Date:  2021-11-20

3.  H3K27me3 shapes DNA methylome by inhibiting UHRF1-mediated H3 ubiquitination.

Authors:  Honglian Zhang; Ying Liu; Yali Xie; Yunji Zhu; Jingwen Liu; Falong Lu
Journal:  Sci China Life Sci       Date:  2022-07-11       Impact factor: 10.372

4.  EED is required for mouse primordial germ cell differentiation in the embryonic gonad.

Authors:  Matthew G Lowe; Ming-Ren Yen; Fei-Man Hsu; Linzi Hosohama; Zhongxun Hu; Tsotne Chitiashvili; Timothy J Hunt; Isaac Gorgy; Matthew Bernard; Sissy E Wamaitha; Pao-Yang Chen; Amander T Clark
Journal:  Dev Cell       Date:  2022-06-08       Impact factor: 13.417

5.  Distinct enhancer signatures in the mouse gastrula delineate progressive cell fate continuum during embryo development.

Authors:  Xianfa Yang; Boqiang Hu; Jiaoyang Liao; Yunbo Qiao; Yingying Chen; Yun Qian; Su Feng; Fang Yu; Ji Dong; Yu Hou; He Xu; Ran Wang; Guangdun Peng; Jinsong Li; Fuchou Tang; Naihe Jing
Journal:  Cell Res       Date:  2019-10-07       Impact factor: 25.617

Review 6.  Mechanisms of early placental development in mouse and humans.

Authors:  Myriam Hemberger; Courtney W Hanna; Wendy Dean
Journal:  Nat Rev Genet       Date:  2019-09-18       Impact factor: 53.242

Review 7.  Nutritional Status Impacts Epigenetic Regulation in Early Embryo Development: A Scoping Review.

Authors:  Shuang Cai; Shuang Quan; Guangxin Yang; Meixia Chen; Qianhong Ye; Gang Wang; Haitao Yu; Yuming Wang; Shiyan Qiao; Xiangfang Zeng
Journal:  Adv Nutr       Date:  2021-10-01       Impact factor: 8.701

8.  Epigenomic analysis of gastrulation identifies a unique chromatin state for primed pluripotency.

Authors:  Yunlong Xiang; Yu Zhang; Qianhua Xu; Chen Zhou; Bofeng Liu; Zhenhai Du; Ke Zhang; Bingjie Zhang; Xiaoxiao Wang; Srimonta Gayen; Ling Liu; Yao Wang; Yuanyuan Li; Qiujun Wang; Sundeep Kalantry; Lei Li; Wei Xie
Journal:  Nat Genet       Date:  2019-12-16       Impact factor: 41.307

Review 9.  Epigenetic Regulation of Intestinal Stem Cells and Disease: A Balancing Act of DNA and Histone Methylation.

Authors:  Alireza Lorzadeh; Maile Romero-Wolf; Ajay Goel; Unmesh Jadhav
Journal:  Gastroenterology       Date:  2021-03-26       Impact factor: 33.883

Review 10.  Epigenetic regulation in development: is the mouse a good model for the human?

Authors:  Courtney W Hanna; Hannah Demond; Gavin Kelsey
Journal:  Hum Reprod Update       Date:  2018-09-01       Impact factor: 15.610
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