Literature DB >> 29457631

Non-invasive genetic censusing and monitoring of primate populations.

Mimi Arandjelovic1, Linda Vigilant1.   

Abstract

Knowing the density or abundance of primate populations is essential for their conservation management and contextualizing socio-demographic and behavioral observations. When direct counts of animals are not possible, genetic analysis of non-invasive samples collected from wildlife populations allows estimates of population size with higher accuracy and precision than is possible using indirect signs. Furthermore, in contrast to traditional indirect survey methods, prolonged or periodic genetic sampling across months or years enables inference of group membership, movement, dynamics, and some kin relationships. Data may also be used to estimate sex ratios, sex differences in dispersal distances, and detect gene flow among locations. Recent advances in capture-recapture models have further improved the precision of population estimates derived from non-invasive samples. Simulations using these methods have shown that the confidence interval of point estimates includes the true population size when assumptions of the models are met, and therefore this range of population size minima and maxima should be emphasized in population monitoring studies. Innovations such as the use of sniffer dogs or anti-poaching patrols for sample collection are important to ensure adequate sampling, and the expected development of efficient and cost-effective genotyping by sequencing methods for DNAs derived from non-invasive samples will automate and speed analyses.
© 2018 Wiley Periodicals, Inc.

Entities:  

Keywords:  capture-recapture; conservation genetics; feces; mark-recapture; population estimation; wildlife monitoring

Mesh:

Year:  2018        PMID: 29457631     DOI: 10.1002/ajp.22743

Source DB:  PubMed          Journal:  Am J Primatol        ISSN: 0275-2565            Impact factor:   2.371


  9 in total

1.  Explaining detection heterogeneity with finite mixture and non-Euclidean movement in spatially explicit capture-recapture models.

Authors:  Robby R Marrotte; Eric J Howe; Kaela B Beauclerc; Derek Potter; Joseph M Northrup
Journal:  PeerJ       Date:  2022-06-07       Impact factor: 3.061

2.  Improving cost-efficiency of faecal genotyping: New tools for elephant species.

Authors:  Stéphanie Bourgeois; Jenny Kaden; Helen Senn; Nils Bunnefeld; Kathryn J Jeffery; Etienne F Akomo-Okoue; Rob Ogden; Ross McEwing
Journal:  PLoS One       Date:  2019-01-30       Impact factor: 3.240

3.  Abundance, density, and social structure of African forest elephants (Loxodonta cyclotis) in a human-modified landscape in southwestern Gabon.

Authors:  Colin M Brand; Mireille B Johnson; Lillian D Parker; Jesús E Maldonado; Lisa Korte; Hadrien Vanthomme; Alfonso Alonso; Maria Jose Ruiz-Lopez; Caitlin P Wells; Nelson Ting
Journal:  PLoS One       Date:  2020-04-29       Impact factor: 3.240

4.  Characterization of 29 polymorphic microsatellite markers developed by genomic screening of Sumatran rhinoceros (Dicerorhinus sumatrensis).

Authors:  Jessica R Brandt; Sinta H Saidah; Kai Zhao; Yasuko Ishida; Isabella Apriyana; Oliver A Ryder; Widodo Ramono; Herawati Sudoyo; Helena Suryadi; Peter J Van Coeverden de Groot; Alfred L Roca
Journal:  BMC Res Notes       Date:  2021-03-26

5.  A refined panel of 42 microsatellite loci to universally genotype catarrhine primates.

Authors:  Franziska Trede; Niels Kil; James Stranks; Andrew Jesse Connell; Julia Fischer; Julia Ostner; Oliver Schülke; Dietmar Zinner; Christian Roos
Journal:  Ecol Evol       Date:  2020-12-13       Impact factor: 2.912

6.  Recent genetic connectivity and clinal variation in chimpanzees.

Authors:  Jack D Lester; Linda Vigilant; Paolo Gratton; Maureen S McCarthy; Christopher D Barratt; Paula Dieguez; Anthony Agbor; Paula Álvarez-Varona; Samuel Angedakin; Emmanuel Ayuk Ayimisin; Emma Bailey; Mattia Bessone; Gregory Brazzola; Rebecca Chancellor; Heather Cohen; Emmanuel Danquah; Tobias Deschner; Villard Ebot Egbe; Manasseh Eno-Nku; Annemarie Goedmakers; Anne-Céline Granjon; Josephine Head; Daniela Hedwig; R Adriana Hernandez-Aguilar; Kathryn J Jeffery; Sorrel Jones; Jessica Junker; Parag Kadam; Michael Kaiser; Ammie K Kalan; Laura Kehoe; Ivonne Kienast; Kevin E Langergraber; Juan Lapuente; Anne Laudisoit; Kevin Lee; Sergio Marrocoli; Vianet Mihindou; David Morgan; Geoffrey Muhanguzi; Emily Neil; Sonia Nicholl; Christopher Orbell; Lucy Jayne Ormsby; Liliana Pacheco; Alex Piel; Martha M Robbins; Aaron Rundus; Crickette Sanz; Lilah Sciaky; Alhaji M Siaka; Veronika Städele; Fiona Stewart; Nikki Tagg; Els Ton; Joost van Schijndel; Magloire Kambale Vyalengerera; Erin G Wessling; Jacob Willie; Roman M Wittig; Yisa Ginath Yuh; Kyle Yurkiw; Klaus Zuberbuehler; Christophe Boesch; Hjalmar S Kühl; Mimi Arandjelovic
Journal:  Commun Biol       Date:  2021-03-05

7.  Two hundred and five newly assembled mitogenomes provide mixed evidence for rivers as drivers of speciation for Amazonian primates.

Authors:  Mareike C Janiak; Felipe E Silva; Robin M D Beck; Dorien de Vries; Lukas F K Kuderna; Nicole S Torosin; Amanda D Melin; Tomàs Marquès-Bonet; Ian B Goodhead; Mariluce Messias; Maria N F da Silva; Iracilda Sampaio; Izeni P Farias; Rogerio Rossi; Fabiano R de Melo; João Valsecchi; Tomas Hrbek; Jean P Boubli
Journal:  Mol Ecol       Date:  2022-06-20       Impact factor: 6.622

8.  CHIIMP: An automated high-throughput microsatellite genotyping platform reveals greater allelic diversity in wild chimpanzees.

Authors:  Hannah J Barbian; Andrew Jesse Connell; Alexa N Avitto; Ronnie M Russell; Andrew G Smith; Madhurima S Gundlapally; Alexander L Shazad; Yingying Li; Frederic Bibollet-Ruche; Emily E Wroblewski; Deus Mjungu; Elizabeth V Lonsdorf; Fiona A Stewart; Alexander K Piel; Anne E Pusey; Paul M Sharp; Beatrice H Hahn
Journal:  Ecol Evol       Date:  2018-07-16       Impact factor: 2.912

9.  Home range size in central chimpanzees (Pan troglodytes troglodytes) from Loango National Park, Gabon.

Authors:  Laura Martínez-Íñigo; Pauline Baas; Harmonie Klein; Simone Pika; Tobias Deschner
Journal:  Primates       Date:  2021-07-04       Impact factor: 2.163

  9 in total

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