Literature DB >> 29456136

A Sex Chromosome piRNA Promotes Robust Dosage Compensation and Sex Determination in C. elegans.

Wen Tang1, Meetu Seth1, Shikui Tu2, En-Zhi Shen1, Qian Li1, Masaki Shirayama3, Zhiping Weng2, Craig C Mello4.   

Abstract

In metazoans, Piwi-related Argonaute proteins engage piRNAs (Piwi-interacting small RNAs) to defend the genome against invasive nucleic acids, such as transposable elements. Yet many organisms-including worms and humans-express thousands of piRNAs that do not target transposons, suggesting that piRNA function extends beyond genome defense. Here, we show that the X chromosome-derived piRNA 21ux-1 downregulates XOL-1 (XO Lethal), a master regulator of X chromosome dosage compensation and sex determination in Caenorhabditis elegans. Mutations in 21ux-1 and several Piwi-pathway components sensitize hermaphrodites to dosage compensation and sex determination defects. We show that the piRNA pathway also targets xol-1 in C. briggsae, a nematode species related to C. elegans. Our findings reveal physiologically important piRNA-mRNA interactions, raising the possibility that piRNAs function broadly to ensure robust gene expression and germline development.
Copyright © 2018. Published by Elsevier Inc.

Entities:  

Keywords:  Caenorhabditis briggsae; Caenorhabditis elegans; dosage compensation; piRNAs; sex determination; small RNAs

Mesh:

Substances:

Year:  2018        PMID: 29456136      PMCID: PMC5991626          DOI: 10.1016/j.devcel.2018.01.025

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  54 in total

1.  A member of the polymerase beta nucleotidyltransferase superfamily is required for RNA interference in C. elegans.

Authors:  Chun-Chieh G Chen; Martin J Simard; Hiroaki Tabara; Daniel R Brownell; Jennifer A McCollough; Craig C Mello
Journal:  Curr Biol       Date:  2005-02-22       Impact factor: 10.834

Review 2.  PIWI-interacting small RNAs: the vanguard of genome defence.

Authors:  Mikiko C Siomi; Kaoru Sato; Dubravka Pezic; Alexei A Aravin
Journal:  Nat Rev Mol Cell Biol       Date:  2011-04       Impact factor: 94.444

3.  Molecular antagonism between X-chromosome and autosome signals determines nematode sex.

Authors:  Behnom Farboud; Paola Nix; Margaret M Jow; John M Gladden; Barbara J Meyer
Journal:  Genes Dev       Date:  2013-05-10       Impact factor: 11.361

4.  xol-1: a gene that controls the male modes of both sex determination and X chromosome dosage compensation in C. elegans.

Authors:  L M Miller; J D Plenefisch; L P Casson; B J Meyer
Journal:  Cell       Date:  1988-10-07       Impact factor: 41.582

5.  Dosage compensation proteins targeted to X chromosomes by a determinant of hermaphrodite fate.

Authors:  H E Dawes; D S Berlin; D M Lapidus; C Nusbaum; T L Davis; B J Meyer
Journal:  Science       Date:  1999-06-11       Impact factor: 47.728

6.  A Small RNA-Catalytic Argonaute Pathway Tunes Germline Transcript Levels to Ensure Embryonic Divisions.

Authors:  Adina Gerson-Gurwitz; Shaohe Wang; Shashank Sathe; Rebecca Green; Gene W Yeo; Karen Oegema; Arshad Desai
Journal:  Cell       Date:  2016-03-24       Impact factor: 41.582

7.  HIM-8 binds to the X chromosome pairing center and mediates chromosome-specific meiotic synapsis.

Authors:  Carolyn M Phillips; Chihunt Wong; Needhi Bhalla; Peter M Carlton; Pinky Weiser; Philip M Meneely; Abby F Dernburg
Journal:  Cell       Date:  2005-12-16       Impact factor: 41.582

Review 8.  piRNAs: from biogenesis to function.

Authors:  Eva-Maria Weick; Eric A Miska
Journal:  Development       Date:  2014-09       Impact factor: 6.868

9.  piRNA-directed cleavage of meiotic transcripts regulates spermatogenesis.

Authors:  Wee Siong Sho Goh; Ilaria Falciatori; Oliver H Tam; Ralph Burgess; Oliver Meikar; Noora Kotaja; Molly Hammell; Gregory J Hannon
Journal:  Genes Dev       Date:  2015-05-15       Impact factor: 11.361

10.  Distinct argonaute-mediated 22G-RNA pathways direct genome surveillance in the C. elegans germline.

Authors:  Weifeng Gu; Masaki Shirayama; Darryl Conte; Jessica Vasale; Pedro J Batista; Julie M Claycomb; James J Moresco; Elaine M Youngman; Jennifer Keys; Matthew J Stoltz; Chun-Chieh G Chen; Daniel A Chaves; Shenghua Duan; Kristin D Kasschau; Noah Fahlgren; John R Yates; Shohei Mitani; James C Carrington; Craig C Mello
Journal:  Mol Cell       Date:  2009-10-01       Impact factor: 17.970

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  18 in total

Review 1.  Emerging roles and functional mechanisms of PIWI-interacting RNAs.

Authors:  Xin Wang; Anne Ramat; Martine Simonelig; Mo-Fang Liu
Journal:  Nat Rev Mol Cell Biol       Date:  2022-09-14       Impact factor: 113.915

2.  Dual roles for nuclear RNAi Argonautes in Caenorhabditis elegans dosage compensation.

Authors:  Michael B Davis; Eshna Jash; Bahaar Chawla; Rebecca A Haines; Lillian E Tushman; Ryan Troll; Györgyi Csankovszki
Journal:  Genetics       Date:  2022-05-05       Impact factor: 4.402

Review 3.  Plant and animal small RNA communications between cells and organisms.

Authors:  Xuemei Chen; Oded Rechavi
Journal:  Nat Rev Mol Cell Biol       Date:  2021-10-27       Impact factor: 113.915

Review 4.  Intergenerational and transgenerational epigenetic inheritance in animals.

Authors:  Marcos Francisco Perez; Ben Lehner
Journal:  Nat Cell Biol       Date:  2019-01-02       Impact factor: 28.824

Review 5.  Small RNAs in epigenetic inheritance: from mechanisms to trait transmission.

Authors:  Germano Cecere
Journal:  FEBS Lett       Date:  2021-10-29       Impact factor: 3.864

6.  Widespread gene duplication and adaptive evolution in the RNA interference pathways of the Drosophila obscura group.

Authors:  Danang Crysnanto; Darren J Obbard
Journal:  BMC Evol Biol       Date:  2019-05-08       Impact factor: 3.260

7.  Identification of piRNA Binding Sites Reveals the Argonaute Regulatory Landscape of the C. elegans Germline.

Authors:  En-Zhi Shen; Hao Chen; Ahmet R Ozturk; Shikui Tu; Masaki Shirayama; Wen Tang; Yue-He Ding; Si-Yuan Dai; Zhiping Weng; Craig C Mello
Journal:  Cell       Date:  2018-02-15       Impact factor: 41.582

8.  Maternal Piwi regulates primordial germ cell development to ensure the fertility of female progeny in Drosophila.

Authors:  Lauren E Gonzalez; Xiongzhuo Tang; Haifan Lin
Journal:  Genetics       Date:  2021-08-26       Impact factor: 4.402

9.  The Coding Regions of Germline mRNAs Confer Sensitivity to Argonaute Regulation in C. elegans.

Authors:  Meetu Seth; Masaki Shirayama; Wen Tang; En-Zhi Shen; Shikui Tu; Heng-Chi Lee; Zhiping Weng; Craig C Mello
Journal:  Cell Rep       Date:  2018-02-15       Impact factor: 9.423

10.  piRTarBase: a database of piRNA targeting sites and their roles in gene regulation.

Authors:  Wei-Sheng Wu; Jordan S Brown; Tsung-Te Chen; Yu-Han Chu; Wei-Che Huang; Shikui Tu; Heng-Chi Lee
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

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