Literature DB >> 29455363

Predicting Autism Spectrum Disorder Using Domain-Adaptive Cross-Site Evaluation.

Runa Bhaumik1, Ashish Pradhan2, Soptik Das2, Dulal K Bhaumik2.   

Abstract

The advances in neuroimaging methods reveal that resting-state functional fMRI (rs-fMRI) connectivity measures can be potential diagnostic biomarkers for autism spectrum disorder (ASD). Recent data sharing projects help us replicating the robustness of these biomarkers in different acquisition conditions or preprocessing steps across larger numbers of individuals or sites. It is necessary to validate the previous results by using data from multiple sites by diminishing the site variations. We investigated partial least square regression (PLS), a domain adaptive method to adjust the effects of multicenter acquisition. A sparse Multivariate Pattern Analysis (MVVPA) framework in a leave one site out cross validation (LOSOCV) setting has been proposed to discriminate ASD from healthy controls using data from six sites in the Autism Brain Imaging Data Exchange (ABIDE). Classification features were obtained using 42 bilateral Brodmann areas without presupposing any prior hypothesis. Our results showed that using PLS, SVM showed poorer accuracies with highest accuracy achieved (62%) than without PLS but not significantly. The regions occurred in two or more informative connections are Dorsolateral Prefrontal Cortex, Somatosensory Association Cortex, Primary Auditory Cortex, Inferior Temporal Gyrus and Temporopolar area. These interrupted regions are involved in executive function, speech, visual perception, sense and language which are associated with ASD. Our findings may support early clinical diagnosis or risk determination by identifying neurobiological markers to distinguish between ASD and healthy controls.

Entities:  

Keywords:  ABIDE; Autism spectrum disorder; Elastic net; Lasso; Partial least square regression; Rs-fMRI; Support vector machine

Mesh:

Year:  2018        PMID: 29455363     DOI: 10.1007/s12021-018-9366-0

Source DB:  PubMed          Journal:  Neuroinformatics        ISSN: 1539-2791


  38 in total

1.  Salience network-based classification and prediction of symptom severity in children with autism.

Authors:  Lucina Q Uddin; Kaustubh Supekar; Charles J Lynch; Amirah Khouzam; Jennifer Phillips; Carl Feinstein; Srikanth Ryali; Vinod Menon
Journal:  JAMA Psychiatry       Date:  2013-08       Impact factor: 21.596

2.  Unreliable evoked responses in autism.

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3.  Distinct neuropsychological subgroups in typically developing youth inform heterogeneity in children with ADHD.

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4.  Impact of methodological variables on functional connectivity findings in autism spectrum disorders.

Authors:  Aarti Nair; Christopher L Keown; Michael Datko; Patricia Shih; Brandon Keehn; Ralph-Axel Müller
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5.  Functional connectivity in a baseline resting-state network in autism.

Authors:  Vladimir L Cherkassky; Rajesh K Kana; Timothy A Keller; Marcel Adam Just
Journal:  Neuroreport       Date:  2006-11-06       Impact factor: 1.837

6.  Multivariate classification of autism spectrum disorder using frequency-specific resting-state functional connectivity--A multi-center study.

Authors:  Heng Chen; Xujun Duan; Feng Liu; Fengmei Lu; Xujing Ma; Youxue Zhang; Lucina Q Uddin; Huafu Chen
Journal:  Prog Neuropsychopharmacol Biol Psychiatry       Date:  2015-07-04       Impact factor: 5.067

Review 7.  Vagaries of visual perception in autism.

Authors:  Steven Dakin; Uta Frith
Journal:  Neuron       Date:  2005-11-03       Impact factor: 17.173

8.  Reduced social preferences in autism: evidence from charitable donations.

Authors:  Alice Lin; Karin Tsai; Antonio Rangel; Ralph Adolphs
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9.  Self-referential cognition and empathy in autism.

Authors:  Michael V Lombardo; Jennifer L Barnes; Sally J Wheelwright; Simon Baron-Cohen
Journal:  PLoS One       Date:  2007-09-12       Impact factor: 3.240

10.  The autism brain imaging data exchange: towards a large-scale evaluation of the intrinsic brain architecture in autism.

Authors:  A Di Martino; C-G Yan; Q Li; E Denio; F X Castellanos; K Alaerts; J S Anderson; M Assaf; S Y Bookheimer; M Dapretto; B Deen; S Delmonte; I Dinstein; B Ertl-Wagner; D A Fair; L Gallagher; D P Kennedy; C L Keown; C Keysers; J E Lainhart; C Lord; B Luna; V Menon; N J Minshew; C S Monk; S Mueller; R-A Müller; M B Nebel; J T Nigg; K O'Hearn; K A Pelphrey; S J Peltier; J D Rudie; S Sunaert; M Thioux; J M Tyszka; L Q Uddin; J S Verhoeven; N Wenderoth; J L Wiggins; S H Mostofsky; M P Milham
Journal:  Mol Psychiatry       Date:  2013-06-18       Impact factor: 15.992

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  8 in total

Review 1.  Towards a Multivariate Biomarker-Based Diagnosis of Autism Spectrum Disorder: Review and Discussion of Recent Advancements.

Authors:  Troy Vargason; Genevieve Grivas; Kathryn L Hollowood-Jones; Juergen Hahn
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2.  Interpretable Learning Approaches in Resting-State Functional Connectivity Analysis: The Case of Autism Spectrum Disorder.

Authors:  Jinlong Hu; Lijie Cao; Tenghui Li; Bin Liao; Shoubin Dong; Ping Li
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3.  Reproducible neuroimaging features for diagnosis of autism spectrum disorder with machine learning.

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4.  rs-fMRI and machine learning for ASD diagnosis: a systematic review and meta-analysis.

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5.  Somatosensory Deficits After Stroke: Insights From MRI Studies.

Authors:  Qiuyi Lv; Junning Zhang; Yuxing Pan; Xiaodong Liu; Linqing Miao; Jing Peng; Lei Song; Yihuai Zou; Xing Chen
Journal:  Front Neurol       Date:  2022-07-12       Impact factor: 4.086

Review 6.  Automatic autism spectrum disorder detection using artificial intelligence methods with MRI neuroimaging: A review.

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Journal:  Front Mol Neurosci       Date:  2022-10-04       Impact factor: 6.261

7.  Towards a brain-based predictome of mental illness.

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Review 8.  Brain imaging-based machine learning in autism spectrum disorder: methods and applications.

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  8 in total

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