Literature DB >> 29449488

Natural noncanonical protein splicing yields products with diverse β-amino acid residues.

Brandon I Morinaka1, Edgars Lakis1, Marjan Verest1, Maximilian J Helf1, Thibault Scalvenzi2, Anna L Vagstad1, James Sims3, Shinichi Sunagawa1, Muriel Gugger2, Jörn Piel4.   

Abstract

Current textbook knowledge holds that the structural scope of ribosomal biosynthesis is based exclusively on α-amino acid backbone topology. Here we report the genome-guided discovery of bacterial pathways that posttranslationally create β-amino acid-containing products. The transformation is widespread in bacteria and is catalyzed by an enzyme belonging to a previously uncharacterized radical S-adenosylmethionine family. We show that the β-amino acids result from an unusual protein splicing process involving backbone carbon-carbon bond cleavage and net excision of tyramine. The reaction can be used to incorporate diverse and multiple β-amino acids into genetically encoded precursors in Escherichia coli In addition to enlarging the set of basic amino acid components, the excision generates keto functions that are useful as orthogonal reaction sites for chemical diversification.
Copyright © 2018 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

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Year:  2018        PMID: 29449488     DOI: 10.1126/science.aao0157

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  25 in total

1.  Spectroscopic and Electrochemical Characterization of the Mycofactocin Biosynthetic Protein, MftC, Provides Insight into Its Redox Flipping Mechanism.

Authors:  Richard Ayikpoe; Thacien Ngendahimana; Michelle Langton; Sheila Bonitatibus; Lindsey M Walker; Sandra S Eaton; Gareth R Eaton; Maria-Eirini Pandelia; Sean J Elliott; John A Latham
Journal:  Biochemistry       Date:  2019-01-25       Impact factor: 3.162

2.  Thermodynamic Scale of β-Amino Acid Residue Propensities for an α-Helix-like Conformation.

Authors:  Brian F Fisher; Seong Ho Hong; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2018-07-19       Impact factor: 15.419

3.  O-Methyltransferase-Mediated Incorporation of a β-Amino Acid in Lanthipeptides.

Authors:  Jeella Z Acedo; Ian R Bothwell; Linna An; Abby Trouth; Clara Frazier; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2019-10-15       Impact factor: 15.419

4.  New Role for Radical SAM Enzymes in the Biosynthesis of Thio(seleno)oxazole RiPP Natural Products.

Authors:  Julia K Lewis; Andrew S Jochimsen; Sarah J Lefave; Anthony P Young; William M Kincannon; Andrew G Roberts; Matthew T Kieber-Emmons; Vahe Bandarian
Journal:  Biochemistry       Date:  2021-11-03       Impact factor: 3.162

5.  Biosynthetic potential of the global ocean microbiome.

Authors:  Hans-Joachim Ruscheweyh; Clarissa C Forneris; Florian Hubrich; Lucas Paoli; Satria Kautsar; Agneya Bhushan; Alessandro Lotti; Quentin Clayssen; Guillem Salazar; Alessio Milanese; Charlotte I Carlström; Chrysa Papadopoulou; Daniel Gehrig; Mikhail Karasikov; Harun Mustafa; Martin Larralde; Laura M Carroll; Pablo Sánchez; Ahmed A Zayed; Dylan R Cronin; Silvia G Acinas; Peer Bork; Chris Bowler; Tom O Delmont; Josep M Gasol; Alvar D Gossert; André Kahles; Matthew B Sullivan; Patrick Wincker; Georg Zeller; Serina L Robinson; Jörn Piel; Shinichi Sunagawa
Journal:  Nature       Date:  2022-06-22       Impact factor: 69.504

6.  Bicyclostreptins are radical SAM enzyme-modified peptides with unique cyclization motifs.

Authors:  Leah B Bushin; Brett C Covington; Kenzie A Clark; Alessio Caruso; Mohammad R Seyedsayamdost
Journal:  Nat Chem Biol       Date:  2022-08-11       Impact factor: 16.174

7.  Investigation of Substrate Recognition and Biosynthesis in Class IV Lanthipeptide Systems.

Authors:  Julian D Hegemann; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2018-04-19       Impact factor: 15.419

8.  The hidden enzymology of bacterial natural product biosynthesis.

Authors:  Thomas A Scott; Jörn Piel
Journal:  Nat Rev Chem       Date:  2019-06-12       Impact factor: 34.035

Review 9.  Mining genomes to illuminate the specialized chemistry of life.

Authors:  Marnix H Medema; Tristan de Rond; Bradley S Moore
Journal:  Nat Rev Genet       Date:  2021-06-03       Impact factor: 53.242

10.  Post-translational formation of strained cyclophanes in bacteria.

Authors:  Thi Quynh Ngoc Nguyen; Yi Wei Tooh; Ryosuke Sugiyama; Thi Phuong Diep Nguyen; Mugilarasi Purushothaman; Li Chuan Leow; Karyna Hanif; Rubin How Sheng Yong; Irene Agatha; Fernaldo R Winnerdy; Muriel Gugger; Anh Tuân Phan; Brandon I Morinaka
Journal:  Nat Chem       Date:  2020-08-17       Impact factor: 24.427

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