Literature DB >> 29443078

Chemo-enzymatic Synthesis of N-glycans for Array Development and HIV Antibody Profiling.

Sachin S Shivatare1, Vidya S Shivatare1, Chung-Yi Wu1, Chi-Huey Wong2.   

Abstract

We present a highly efficient way for the rapid preparation of a wide range of N-linked oligosaccharides (estimated to exceed 20,000 structures) that are commonly found on human glycoproteins. To achieve the desired structural diversity, the strategy began with the chemo-enzymatic synthesis of three kinds of oligosaccharyl fluoride modules, followed by their stepwise α-selective glycosylations at the 3-O and 6-O positions of the mannose residue of the common core trisaccharide having a crucial β-mannoside linkage. We further attached the N-glycans to the surface of an aluminum oxide-coated glass (ACG) slide to create a covalent mixed array for the analysis of hetero-ligand interaction with an HIV antibody. In particular, the binding behavior of a newly isolated HIV-1 broadly neutralizing antibody (bNAb), PG9, to the mixture of closely spaced Man5GlcNAc2 (Man5) and 2,6-di-sialylated bi-antennary complex type N-glycan (SCT) on an ACG array, opens a new avenue to guide the effective immunogen design for HIV vaccine development. In addition, our ACG array embodies a powerful tool to study other HIV antibodies for hetero-ligand binding behavior.

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Year:  2018        PMID: 29443078      PMCID: PMC5912354          DOI: 10.3791/55855

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  25 in total

1.  A general strategy for the chemoenzymatic synthesis of asymmetrically branched N-glycans.

Authors:  Zhen Wang; Zoeisha S Chinoy; Shailesh G Ambre; Wenjie Peng; Ryan McBride; Robert P de Vries; John Glushka; James C Paulson; Geert-Jan Boons
Journal:  Science       Date:  2013-07-26       Impact factor: 47.728

2.  Conserved Role of an N-Linked Glycan on the Surface Antigen of Human Immunodeficiency Virus Type 1 Modulating Virus Sensitivity to Broadly Neutralizing Antibodies against the Receptor and Coreceptor Binding Sites.

Authors:  Samantha Townsley; Yun Li; Yury Kozyrev; Brad Cleveland; Shiu-Lok Hu
Journal:  J Virol       Date:  2015-10-28       Impact factor: 5.103

3.  Printed covalent glycan array for ligand profiling of diverse glycan binding proteins.

Authors:  Ola Blixt; Steve Head; Tony Mondala; Christopher Scanlan; Margaret E Huflejt; Richard Alvarez; Marian C Bryan; Fabio Fazio; Daniel Calarese; James Stevens; Nahid Razi; David J Stevens; John J Skehel; Irma van Die; Dennis R Burton; Ian A Wilson; Richard Cummings; Nicolai Bovin; Chi-Huey Wong; James C Paulson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-24       Impact factor: 11.205

4.  Surface characterization of carbohydrate microarrays.

Authors:  David J Scurr; Tim Horlacher; Matthias A Oberli; Daniel B Werz; Lenz Kroeck; Simone Bufali; Peter H Seeberger; Alexander G Shard; Morgan R Alexander
Journal:  Langmuir       Date:  2010-10-18       Impact factor: 3.882

Review 5.  Sweet spots in functional glycomics.

Authors:  James C Paulson; Ola Blixt; Brian E Collins
Journal:  Nat Chem Biol       Date:  2006-05       Impact factor: 15.040

6.  Asymmetric recognition of the HIV-1 trimer by broadly neutralizing antibody PG9.

Authors:  Jean-Philippe Julien; Jeong Hyun Lee; Albert Cupo; Charles D Murin; Ronald Derking; Simon Hoffenberg; Michael J Caulfield; C Richter King; Andre J Marozsan; Per Johan Klasse; Rogier W Sanders; John P Moore; Ian A Wilson; Andrew B Ward
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-20       Impact factor: 11.205

7.  Effect of Glycosylation on an Immunodominant Region in the V1V2 Variable Domain of the HIV-1 Envelope gp120 Protein.

Authors:  Jianhui Tian; Cesar A López; Cynthia A Derdeyn; Morris S Jones; Abraham Pinter; Bette Korber; S Gnanakaran
Journal:  PLoS Comput Biol       Date:  2016-10-07       Impact factor: 4.475

8.  Cell- and Protein-Directed Glycosylation of Native Cleaved HIV-1 Envelope.

Authors:  Laura K Pritchard; David J Harvey; Camille Bonomelli; Max Crispin; Katie J Doores
Journal:  J Virol       Date:  2015-06-17       Impact factor: 5.103

9.  Efficient Chemoenzymatic Synthesis of an N-glycan Isomer Library.

Authors:  Lei Li; Yunpeng Liu; Cheng Ma; Jingyao Qu; Angie D Calderon; Baolin Wu; Na Wei; Xuan Wang; Yuxi Guo; Zhongying Xiao; Jing Song; Go Sugiarto; Yanhong Li; Hai Yu; Xi Chen; Peng George Wang
Journal:  Chem Sci       Date:  2015-06-23       Impact factor: 9.825

10.  Composition and Antigenic Effects of Individual Glycan Sites of a Trimeric HIV-1 Envelope Glycoprotein.

Authors:  Anna-Janina Behrens; Snezana Vasiljevic; Laura K Pritchard; David J Harvey; Rajinder S Andev; Stefanie A Krumm; Weston B Struwe; Albert Cupo; Abhinav Kumar; Nicole Zitzmann; Gemma E Seabright; Holger B Kramer; Daniel I R Spencer; Louise Royle; Jeong Hyun Lee; Per J Klasse; Dennis R Burton; Ian A Wilson; Andrew B Ward; Rogier W Sanders; John P Moore; Katie J Doores; Max Crispin
Journal:  Cell Rep       Date:  2016-03-10       Impact factor: 9.423

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