| Literature DB >> 29438397 |
Melissa Louise Kelly1,2,3, Stephen M Riordan4,5, Rohan Bopage2, Andrew R Lloyd1,3,6, Jeffrey John Post1,2,3,4.
Abstract
INTRODUCTION: Achievement of the 2030 World Health Organisation (WHO) global hepatitis C virus (HCV) elimination targets will be underpinned by scale-up of testing and use of direct-acting antiviral treatments. In Australia, despite publically-funded testing and treatment, less than 15% of patients were treated in the first year of treatment access, highlighting the need for greater efficiency of health service delivery. To this end, non-invasive fibrosis algorithms were examined to reduce reliance on transient elastography (TE) which is currently utilised for the assessment of cirrhosis in most Australian clinical settings.Entities:
Mesh:
Year: 2018 PMID: 29438397 PMCID: PMC5811020 DOI: 10.1371/journal.pone.0192763
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Indices utilised in the non-invasive algorithms included.
| Algorithm | Indices utilised | |||||||
|---|---|---|---|---|---|---|---|---|
| Age | AST | ALT | ALT/AST | GGT | Platelet count | INR | Total cholesterol | |
| x | x | |||||||
| x | x | x | ||||||
| x | x | x | x | |||||
| x | x | x | x | |||||
| x | x | x | ||||||
| x | x | x | x | |||||
| x | x | x | x | |||||
APRI = AST to Platelet Ratio Index, CDS = Cirrhosis discriminant score, FIB-4 = Fibrosis-4 score, Forns’ = Forns’ Index, GUCI = Göteborg University Cirrhosis Index, King’s = King’s Score, LOK = Lok Index. AST = aspartate aminotransferase, ALT = alanine aminotransferase level, GGT = ɣ-glutamyl transpeptidase, INR = international normalised ratio
Characteristics of subjects with HCV mono-infection and HCV co-infection.
| Derivation cohort | Validation cohort | Total mono-infected cohort | Co-infected cohort | |
|---|---|---|---|---|
| Prison service | 424 (72.1%) | 138 (71.9%) | 562 (72.1%) | 10 (14.3%) |
| Hospital | 150 (25.5%) | 52 (27.1%) | 202 (25.9%) | 5 (7.1%) |
| Sexual Health clinic | 14 (2.4%) | 2 (1.0%) | 16 (2.0%) | 55 (78.6%) |
| Male | 456 (77.6%) | 156 (81.3%) | 612 (78.5%) | 65 (92.9%) |
| Female | 131 (22.3%) | 36 (18.8%) | 167 (21.4%) | 5 (7.1%) |
| Transgender | 1 (0.2%) | 0 (0%) | 1 (0.1%) | 0 (0%) |
| Yrs median (range) | 41 (18–83) | 41 (20–76) | 41 (18–83) | 44 (26–73) |
| 1a/b | 312 (53.1%) | 113 (58.9%) | 425 (54.5%) | 43 (61.4%) |
| 2 | 14 (2.4%) | 8 (4.2%) | 22 (2.8%) | 2 (2.9%) |
| 3 | 237 (40.3%) | 66 (34.4%) | 303 (38.8%) | 20 (28.6%) |
| 4 | 10 (1.7%) | 1 (0.5%) | 11 (1.4%) | 2 (2.9%) |
| 6 | 2 (0.3%) | 0 (0%) | 2 (0.3%) | 1 (1.4%) |
| Mixed | 7 (1.2%) | 3 (1.6%) | 10 (1.3%) | 0 (0%) |
| Unknown | 6 (1.0%) | 1 (0.5%) | 7 (0.9%) | 2 (2.9%) |
| 94 (16.0%) | 31 (16.1%) | 125 (16.0%) | 15 (21.4%) | |
| Prison Service | 49/424 (11.6%) | 20/138 (14.5%) | 69/562 (12.3%) | 6/10 (60%) |
| Hospital | 44/150 (29.3%) | 10/52 (19.2%) | 54/202 (26.7%) | 0/5 (0%) |
N = total number
Performance of non-invasive fibrosis algorithms in excluding cirrhosis in people with HCV infection.
| Algorithms | Cut off | Mono-infection Derivation Cohort | Mono-infection Validation Cohort | Mono-infection Men | Mono-infection Women | Mono-infection ALL subjects | Co-infection ALL subjects |
|---|---|---|---|---|---|---|---|
| 1.0 | ___ | ___ | 94% (91–96%), 415/612 (67.8%) | 93% (88–97%), 127/167 (76.0%) | 94% (91–96%), 542/780 (69.5%) | 98% (88–100%), 45/70 (64.3%) | |
| 0.86 | ___ | ___ | 95% (93–97%), 379/612 (61.9%) | 94% (88–97%), 122/167 (73.1%) | 95% (93–97%), 501/780 (64.2%) | 98% (87–100%), 40/70 (57.1%) | |
| 0.49 | 98% (96–100%), 588 | 100% (95–100%), 192 | 99% (97–100%), 232/612 (37.9%) | 98% (92–100%), 83/167 (49.7%) | 99% (97–100%), 315/780 (40.4%) | 97% (83–100%), 29/70 (41.4%) | |
| 0.24 | 100% (92–100%), 588 | 100% (77–100%), 192 | 100% (91–100%), 41/612 (6.7%) | 100% (83–100%), 20/167 (12.0%) | 100% (94–100%), 61/780 (7.8%) | 100% (54–100%), 6/70 (8.6%) | |
| < 7 | ___ | ___ | 88% (84–90%), 477/586 (81.4%) | 90% (84–94%), 133/163 (81.6%) | 88% (85–90%), 609/749 (81.3%) | 84% (71–92%), 46/64 (71.9%) | |
| < 4 | 98% (95–99%), 561 | 95% (87–99%), 188 | 97% (94–99%), 233/586 (39.8%) | 97% (91–100%), 75/163 (46.0%) | 97% (94–98%), 308/749 (41.1%) | 95% (76–100%), 20/64 (31.3%) | |
| < 3 | 100% (97–100%), 561 | 97% (86–100%), 188 | 99% (95–100%), 111/586 (18.9%) | 100% (91–100%), 41/163 (25.2%) | 99% (96–100%), 152/749 (20.3%) | 100% (59–100%), 7/64 (10.9%) | |
| 1.45 | ___ | ___ | 97% (94–98%), 395/612 (64.5%) | 97% (92–99%), 99/167 (59.3%) | 97% (95–98%), 494/780 (63.3%) | 90% (76–97%), 36/70 (50.4%) | |
| 0.93 | 99% (96–100%), 588 | 100% (95–100%), 192 | 99% (97–100%), 249/612 (40.7%) | 98% (91–100%), 61/167 (36.5%) | 99% (97–100%), 310/780 (39.7%) | 100% (84–100%), 21/70 (30.0%) | |
| 0.6 | 100% (96–100%), 588 | 100% (88–100%), 192 | 100% (96–100%), 103/612 (16.8%) | 100% (87–100%), 26/167 (15.6%) | 100% (97–100%), 129/780 (16.5%) | 100% (16–100%), 2/70 (2.9%) | |
| 5.93 | ___ | ___ | 94% (91–97%), 318/459 (69.3%) | 97% (91–99%), 90/132 (68.2%) | 95% (92–97%), 408/592 (68.9%) | 95% (82–99%), 35/55 (63.6%) | |
| 4.2 | ___ | ___ | 99% (97–100%), 185/459 (40.3%) | 98% (90–100%), 53/132 (40.2%) | 99% (97–100%), 238/592 (45.3%) | 100% (79–100%), 16/55 (29.1%) | |
| 3.88 | 100% (98–100%), 451 | 100% (92–100%), 141 | 100% (98–100%), 159/459 (34.6%) | 100% (91–100%), 41/132 (31.1%) | 100% (98–100%), 200/592 (33.8%) | 100% (75–100%), 13/55 (23.6%) | |
| 1.0 | ___ | ___ | 95% (92–97%), 382/586 (65.2%) | 94% (88–97%), 121/163 (74.2%) | 95% (92–96%), 503/749 (67.2%) | 97% (87–100%), 38/64 (59.4%) | |
| 0.5 | 98% (96–100%), 561 | 100% (95–100%), 188 | 99% (97–100%), 213/586 (48.3%) | 98% (92–100%), 85/163 (52.1%) | 99% (97–100%), 298/749 (39.8%) | 96% (81–100%), 26/64 (40.6%) | |
| 0.21 | 100% (85–100%), 561 | 100% (69–100%), 188 | 100% (83–100%), 20/586 (3.4%) | 100% (74–100%), 12/163 (7.4%) | 100% (89–100%), 32/749 (4.3%) | 100% (2.5–100%), 1/64 (1.6%) | |
| 16.7 | ___ | ___ | 96% (94–98%), 387/586 (66.0%) | 95% (90–98%), 121/163 (74.2%) | 96% (94–98%), 508/749 (67.8%) | 97% (86–100%), 37/64 (57.8%) | |
| 8.7 | 98% (95–99%), 561 | 100% (95–100%), 188 | 99% (97–100%), 243/586 (41.5%) | 96% (90–99%), 80/163 (49.1%) | 98% (96–100%), 323/749 (43.1%) | 100% (85–100%, 23/64 (35.9%) | |
| 5.46 | 100% (97–100%), 561 | 100% (92–100%), 188 | 100% (97–100%), 129/586 (22.0%) | 100% (92–100%), 44/163 (27.0%) | 100% (98–100%), 173/749 (23.1%) | 100% (74–100%), 12/64 (18.8%) | |
| 0.2 | ___ | ___ | 96% (93–98%), 206/586 (35.2%) | 95% (88–99%), 79/163 (48.5%) | 96% (93–98%), 285/749 (38.1%) | 93% (76–99%), 25/64 (39.1%) | |
| 0.168 | 98% (94–99%), 561 | 96% (86–100%), 188 | 98% (94–100%), 152/586 (25.9%) | 96% (87–99%), 64/163 (39.3%) | 97% (94–99%), 216/749 (28.8%) | 89% (67–99%), 17/64 (26.6%) | |
| 0.109 | 100% (95–100%), 561 | 96% (80–100%), 188 | 98% (91–100%), 60/586 (10.2%) | 100% (91–100%), 38/163 (23.3%) | 99% (95–100%), 98/749 (13.1%) | 100% (48–100%), 5/64 (7.8%) |
NPV = negative predictive value, CI = confidence interval, N = total number, TE = transient elastography. APRI = AST to Platelet Ratio Index, CDS = Cirrhosis discriminant score, FIB-4 = Fibrosis-4 score, Forns’ = Forns’ Index, GUCI = Göteborg University Cirrhosis Index, King’s = King’s Score, LOK = Lok Index.
Performance of combinations of non-invasive fibrosis algorithms in excluding cirrhosis in people with HCV infection.
| Algorithms with cut-off values | Mono-infection ALL subjects |
|---|---|
| 99% (97–99%), 418/780 (53.6%) | |
| 99% (97–99%), 319/749 (42.6%) | |
| 98% (97–99%), 398/749 (53.1%) | |
| 99% (97–99%), 405/749 (54.1%) |
NPV = negative predictive value, CI = confidence interval, TE = transient elastography, N = total number. APRI = AST to Platelet Ratio Index, FIB-4 = Fibrosis-4 score, GUCI = Göteborg University Cirrhosis Index.