Literature DB >> 29432144

Single-channel recordings of RyR1 at microsecond resolution in CMOS-suspended membranes.

Andreas J W Hartel1, Peijie Ong2, Indra Schroeder3, M Hunter Giese4, Siddharth Shekar5, Oliver B Clarke6, Ran Zalk4, Andrew R Marks4, Wayne A Hendrickson4,6, Kenneth L Shepard1.   

Abstract

Single-channel recordings are widely used to explore functional properties of ion channels. Typically, such recordings are performed at bandwidths of less than 10 kHz because of signal-to-noise considerations, limiting the temporal resolution available for studying fast gating dynamics to greater than 100 µs. Here we present experimental methods that directly integrate suspended lipid bilayers with high-bandwidth, low-noise transimpedance amplifiers based on complementary metal-oxide-semiconductor (CMOS) integrated circuits (IC) technology to achieve bandwidths in excess of 500 kHz and microsecond temporal resolution. We use this CMOS-integrated bilayer system to study the type 1 ryanodine receptor (RyR1), a Ca2+-activated intracellular Ca2+-release channel located on the sarcoplasmic reticulum. We are able to distinguish multiple closed states not evident with lower bandwidth recordings, suggesting the presence of an additional Ca2+ binding site, distinct from the site responsible for activation. An extended beta distribution analysis of our high-bandwidth data can be used to infer closed state flicker events as fast as 35 ns. These events are in the range of single-file ion translocations.

Entities:  

Keywords:  CMOS; lab-on-a-chip; patch clamp; protein structure-and-function

Mesh:

Substances:

Year:  2018        PMID: 29432144      PMCID: PMC5828579          DOI: 10.1073/pnas.1712313115

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Single-channel currents recorded from membrane of denervated frog muscle fibres.

Authors:  E Neher; B Sakmann
Journal:  Nature       Date:  1976-04-29       Impact factor: 49.962

Review 2.  How to resolve microsecond current fluctuations in single ion channels: the power of beta distributions.

Authors:  Indra Schroeder
Journal:  Channels (Austin)       Date:  2015       Impact factor: 2.581

3.  The kinetics of calcium binding to fura-2 and indo-1.

Authors:  A P Jackson; M P Timmerman; C R Bagshaw; C C Ashley
Journal:  FEBS Lett       Date:  1987-05-25       Impact factor: 4.124

4.  Molecular dynamics of ion transport through the open conformation of a bacterial voltage-gated sodium channel.

Authors:  Martin B Ulmschneider; Claire Bagnéris; Emily C McCusker; Paul G Decaen; Markus Delling; David E Clapham; Jakob P Ulmschneider; B A Wallace
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-29       Impact factor: 11.205

Review 5.  What do we not know about mitochondrial potassium channels?

Authors:  Michał Laskowski; Bartłomiej Augustynek; Bogusz Kulawiak; Piotr Koprowski; Piotr Bednarczyk; Wieslawa Jarmuszkiewicz; Adam Szewczyk
Journal:  Biochim Biophys Acta       Date:  2016-03-04

6.  Single channel currents at six microsecond resolution elicited by acetylcholine in mouse myoballs.

Authors:  F Parzefall; R Wilhelm; M Heckmann; J Dudel
Journal:  J Physiol       Date:  1998-10-01       Impact factor: 5.182

7.  Reconstitution of the skeletal muscle ryanodine receptor-Ca2+ release channel protein complex into proteoliposomes.

Authors:  H B Lee; L Xu; G Meissner
Journal:  J Biol Chem       Date:  1994-05-06       Impact factor: 5.157

8.  A mechanistic description of gating of the human cardiac ryanodine receptor in a regulated minimal environment.

Authors:  Saptarshi Mukherjee; N Lowri Thomas; Alan J Williams
Journal:  J Gen Physiol       Date:  2012-07-16       Impact factor: 4.086

9.  Ca2+ block and flickering both contribute to the negative slope of the IV curve in BK channels.

Authors:  Indra Schroeder; Gerhard Thiel; Ulf-Peter Hansen
Journal:  J Gen Physiol       Date:  2013-04       Impact factor: 4.086

10.  Two regions of the ryanodine receptor calcium channel are involved in Ca(2+)-dependent inactivation.

Authors:  Angela C Gomez; Naohiro Yamaguchi
Journal:  Biochemistry       Date:  2014-02-21       Impact factor: 3.162

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  7 in total

Review 1.  High bandwidth approaches in nanopore and ion channel recordings - A tutorial review.

Authors:  Andreas J W Hartel; Siddharth Shekar; Peijie Ong; Indra Schroeder; Gerhard Thiel; Kenneth L Shepard
Journal:  Anal Chim Acta       Date:  2019-01-25       Impact factor: 6.558

2.  Microsecond dynamics in proteins by two-dimensional ESR: Predictions.

Authors:  Pranav Gupta; Zhichun Liang; Jack H Freed
Journal:  J Chem Phys       Date:  2020-06-07       Impact factor: 3.488

3.  Wavelet Denoising of High-Bandwidth Nanopore and Ion-Channel Signals.

Authors:  Siddharth Shekar; Chen-Chi Chien; Andreas Hartel; Peijie Ong; Oliver B Clarke; Andrew Marks; Marija Drndic; Kenneth L Shepard
Journal:  Nano Lett       Date:  2019-01-07       Impact factor: 11.189

4.  Photolithographic Fabrication of Micro Apertures in Dry Film Polymer Sheets for Channel Recordings in Planar Lipid Bilayers.

Authors:  Mario El Khoury; Tobias Winterstein; Wadim Weber; Viktor Stein; Helmut F Schlaak; Gerhard Thiel
Journal:  J Membr Biol       Date:  2019-03-12       Impact factor: 1.843

5.  Extended beta distributions open the access to fast gating in bilayer experiments-assigning the voltage-dependent gating to the selectivity filter.

Authors:  Oliver Rauh; Ulf-Peter Hansen; Sebastian Mach; Andreas J W Hartel; Kenneth L Shepard; Gerhard Thiel; Indra Schroeder
Journal:  FEBS Lett       Date:  2017-11-19       Impact factor: 4.124

Review 6.  Comparing Current Noise in Biological and Solid-State Nanopores.

Authors:  Alessio Fragasso; Sonja Schmid; Cees Dekker
Journal:  ACS Nano       Date:  2020-02-17       Impact factor: 15.881

7.  Monitoring the heterogeneity in single cell responses to drugs using electrochemical impedance and electrochemical noise.

Authors:  Ying Yang; Friederike M Mansfeld; Maria Kavallaris; Katharina Gaus; Richard D Tilley; J Justin Gooding
Journal:  Chem Sci       Date:  2020-12-28       Impact factor: 9.825

  7 in total

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