Literature DB >> 29429052

Molecular and Clinical Aspects of Protein Aggregation Assays in Neurodegenerative Diseases.

Anna Villar-Piqué1, Matthias Schmitz2, Niccolò Candelise3, Salvador Ventura4, Franc Llorens5, Inga Zerr3.   

Abstract

The presence of protein deposits is a common pathological hallmark in patients suffering from neurodegenerative conditions and other proteinopathies. Deciphering the molecular basis of protein misfolding and aggregation is a crucial step towards the full comprehension of the factors that trigger the onset of these diseases and for the development of efficient therapeutical strategies. In this regard, in vitro aggregation assays for misfolded proteins offer an excellent tool to study pathological processes of protein deposition under controlled conditions, where confounders can be easily discriminated. These methods are generally cost-effective and have been proved useful in many fields, including drug discovery and clinical diagnostics. Here, we review the bases of in vitro aggregation and seeding assays, recapitulate their main applications and offer a critical evaluation of their limitations. Comprehending the molecular mechanisms behind these assays and combining them with in vivo or cell-based experiments will maximize their potential and allow the necessary improvement to overcome some of the current drawbacks.

Entities:  

Keywords:  In vitro aggregation assays; Neurodegeneration; Prion; Protein misfolding; Seeding

Mesh:

Substances:

Year:  2018        PMID: 29429052     DOI: 10.1007/s12035-018-0926-y

Source DB:  PubMed          Journal:  Mol Neurobiol        ISSN: 0893-7648            Impact factor:   5.590


  168 in total

1.  The role of protein sequence and amino acid composition in amyloid formation: scrambling and backward reading of IAPP amyloid fibrils.

Authors:  Raimon Sabaté; Alba Espargaró; Natalia S de Groot; Juan José Valle-Delgado; Xavier Fernàndez-Busquets; Salvador Ventura
Journal:  J Mol Biol       Date:  2010-09-29       Impact factor: 5.469

2.  Concurrence of TDP-43, tau and alpha-synuclein pathology in brains of Alzheimer's disease and dementia with Lewy bodies.

Authors:  Shinji Higashi; Eizo Iseki; Ryoko Yamamoto; Michiko Minegishi; Hiroaki Hino; Koshiro Fujisawa; Takashi Togo; Omi Katsuse; Hirotake Uchikado; Yoshiko Furukawa; Kenji Kosaka; Heii Arai
Journal:  Brain Res       Date:  2007-10-25       Impact factor: 3.252

3.  Identification of new molecular alterations in fatal familial insomnia.

Authors:  Franc Llorens; Katrin Thüne; Matthias Schmitz; Belén Ansoleaga; Margalida A Frau-Méndez; Maria Cramm; Waqas Tahir; Nadine Gotzmann; Sara Berjaoui; Margarita Carmona; Christopher J Silva; Ivan Fernandez-Vega; Juan José Zarranz; Inga Zerr; Isidro Ferrer
Journal:  Hum Mol Genet       Date:  2016-04-07       Impact factor: 6.150

4.  Lewy bodies in Alzheimer's disease: a neuropathological review of 145 cases using alpha-synuclein immunohistochemistry.

Authors:  R L Hamilton
Journal:  Brain Pathol       Date:  2000-07       Impact factor: 6.508

5.  In vivo demonstration that alpha-synuclein oligomers are toxic.

Authors:  Beate Winner; Roberto Jappelli; Samir K Maji; Paula A Desplats; Leah Boyer; Stefan Aigner; Claudia Hetzer; Thomas Loher; Marçal Vilar; Silvia Campioni; Christos Tzitzilonis; Alice Soragni; Sebastian Jessberger; Helena Mira; Antonella Consiglio; Emiley Pham; Eliezer Masliah; Fred H Gage; Roland Riek
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-15       Impact factor: 11.205

6.  Distinguishing crystal-like amyloid fibrils and glass-like amorphous aggregates from their kinetics of formation.

Authors:  Yuichi Yoshimura; Yuxi Lin; Hisashi Yagi; Young-Ho Lee; Hiroki Kitayama; Kazumasa Sakurai; Masatomo So; Hirotsugu Ogi; Hironobu Naiki; Yuji Goto
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-20       Impact factor: 11.205

7.  The role of glycophosphatidylinositol anchor in the amplification of the scrapie isoform of prion protein in vitro.

Authors:  Jae-Il Kim; Krystyna Surewicz; Pierluigi Gambetti; Witold K Surewicz
Journal:  FEBS Lett       Date:  2009-10-23       Impact factor: 4.124

8.  Stability and Reproducibility Underscore Utility of RT-QuIC for Diagnosis of Creutzfeldt-Jakob Disease.

Authors:  Maria Cramm; Matthias Schmitz; André Karch; Eva Mitrova; Franziska Kuhn; Bjoern Schroeder; Alex Raeber; Daniela Varges; Yong-Sun Kim; Katsuya Satoh; Steven Collins; Inga Zerr
Journal:  Mol Neurobiol       Date:  2015-04-01       Impact factor: 5.590

9.  Prion-specific and surrogate CSF biomarkers in Creutzfeldt-Jakob disease: diagnostic accuracy in relation to molecular subtypes and analysis of neuropathological correlates of p-tau and Aβ42 levels.

Authors:  Francesca Lattanzio; Samir Abu-Rumeileh; Alessia Franceschini; Hideaki Kai; Giulia Amore; Ilaria Poggiolini; Marcello Rossi; Simone Baiardi; Lynne McGuire; Anna Ladogana; Maurizio Pocchiari; Alison Green; Sabina Capellari; Piero Parchi
Journal:  Acta Neuropathol       Date:  2017-02-15       Impact factor: 17.088

10.  Role of pH-induced structural change in protein aggregation in foam fractionation of bovine serum albumin.

Authors:  Rui Li; Zhaoliang Wu; Yanji Wangb; Linlin Ding; Yanyan Wang
Journal:  Biotechnol Rep (Amst)       Date:  2016-01-22
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  3 in total

1.  Alterations in neuronal metabolism contribute to the pathogenesis of prion disease.

Authors:  Julie-Myrtille Bourgognon; Jereme G Spiers; Hannah Scheiblich; Alexey Antonov; Sophie J Bradley; Andrew B Tobin; Joern R Steinert
Journal:  Cell Death Differ       Date:  2018-06-18       Impact factor: 15.828

Review 2.  Effect of the micro-environment on α-synuclein conversion and implication in seeded conversion assays.

Authors:  Niccolo Candelise; Matthias Schmitz; Katrin Thüne; Maria Cramm; Alberto Rabano; Saima Zafar; Erik Stoops; Hugo Vanderstichele; Anna Villar-Pique; Franc Llorens; Inga Zerr
Journal:  Transl Neurodegener       Date:  2020-01-17       Impact factor: 8.014

Review 3.  Protein Co-Aggregation Related to Amyloids: Methods of Investigation, Diversity, and Classification.

Authors:  Stanislav A Bondarev; Kirill S Antonets; Andrey V Kajava; Anton A Nizhnikov; Galina A Zhouravleva
Journal:  Int J Mol Sci       Date:  2018-08-04       Impact factor: 5.923

  3 in total

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