| Literature DB >> 29426278 |
Tao Zhang1, Kuiying Yu2, Xuhua Li3.
Abstract
BACKGROUND: Inconsistent conclusions have been reported for the genetic relationship between CYP4F2 (Cytochrome P450 Family 4 Subfamily F Member 2) polymorphisms and the susceptibility to cardiovascular and cerebrovascular diseases.Entities:
Keywords: CYP4F2; Coronary artery disease; Hypertension; Ischemic stroke; Single nucleotide polymorphisms
Mesh:
Substances:
Year: 2018 PMID: 29426278 PMCID: PMC5807755 DOI: 10.1186/s12872-018-0763-y
Source DB: PubMed Journal: BMC Cardiovasc Disord ISSN: 1471-2261 Impact factor: 2.298
Fig. 1Flow diagram of the eligible case-control studies identified
Meta-analysis of CYP4AF2 rs1558139 C/T polymorphism
| Genetic models | Subgroup | Test of association | N | Sample size | Heterogeneity | ||||
|---|---|---|---|---|---|---|---|---|---|
| OR (95% CIs) | z | case | control | I2 | |||||
| allele (T vs. C) | overall/Asian | 0.92 (0.86, 0.99) | 2.31 | 0.021 | 10 | 3462 | 3547 | 0.0% | 0.931 |
| hypertension | 0.89 (0.81, 0.98) | 2.34 | 0.019 | 4 | 1852 | 1787 | 0.0% | 0.768 | |
| CAD | 1.00 (0.87, 1.14) | 0.05 | 0.963 | 3 | 883 | 914 | 0.0% | 0.685 | |
| population-based | 0.91 (0.85, 0.98) | 2.49 | 0.013 | 8 | 2927 | 3033 | 0.0% | 0.967 | |
| homozygote (TT vs. CC) | overall | 0.87 (0.76, 1.00) | 1.89 | 0.058 | 10 | 3462 | 3547 | 0.0% | 0.955 |
| hypertension | 0.85 (0.70, 1.04) | 1.59 | 0.111 | 4 | 1852 | 1787 | 0.0% | 0.900 | |
| CAD | 0.99 (0.76, 1.30) | 0.05 | 0.963 | 3 | 883 | 914 | 0.0% | 0.609 | |
| population-based | 0.85 (0.70, 1.04) | 1.99 | 0.047 | 8 | 2927 | 3033 | 0.0% | 0.991 | |
| heterozygote (CT vs. CC) | overall/Asian | 0.89 (0.80, 0.98) | 2.26 | 0.024 | 10 | 3462 | 3547 | 0.0% | 0.738 |
| hypertension | 0.81 (0.70, 0.93) | 2.95 | 0.003 | 4 | 1852 | 1787 | 0.0% | 0.565 | |
| CAD | 0.98 (0.79, 1.21) | 0.18 | 0.857 | 3 | 883 | 914 | 0.0% | 0.977 | |
| population-based | 0.87 (0.78, 0.97) | 2.46 | 0.014 | 8 | 2927 | 3033 | 0.0% | 0.662 | |
| dominant (CT + TT vs. CC) | overall | 0.88 (0.80, 0.97) | 2.53 | 0.012 | 10 | 3462 | 3547 | 0.0% | 0.866 |
| hypertension | 0.82 (0.71, 0.93) | 2.95 | 0.003 | 4 | 1852 | 1787 | 0.0% | 0.650 | |
| CAD | 0.98 (0.80, 1.20) | 0.16 | 0.871 | 3 | 883 | 914 | 0.0% | 0.952 | |
| population-based | 0.86 (0.78, 0.96) | 2.71 | 0.007 | 8 | 2927 | 3033 | 0.0% | 0.821 | |
| recessive (TT vs. CC + CT) | overall/Asian | 0.93 (0.82, 1.06) | 1.03 | 0.303 | 10 | 3462 | 3547 | 0.0% | 0.889 |
| hypertension | 0.95 (0.80, 1.14) | 0.52 | 0.601 | 4 | 1852 | 1787 | 0.0% | 0.898 | |
| CAD | 1.01 (0.80, 1.28) | 0.11 | 0.914 | 3 | 883 | 914 | 0.0% | 0.483 | |
| population-based | 0.92 (0.80, 1.06) | 1.14 | 0.256 | 8 | 2927 | 3033 | 0.0% | 0.977 | |
OR odds ratio, CIs confidence intervals, CAD coronary artery disease, N number of case-control studies
Fig. 2Subgroup analysis by disease type of the association between the CYP4AF2 rs1558139 polymorphism and the risk of cardiovascular and cerebrovascular diseases under the heterozygote model
Meta-analysis of CYP4AF2 rs2108622 G/A polymorphism
| Genetic models | Subgroup | Test of association | N | Sample size | Heterogeneity | ||||
|---|---|---|---|---|---|---|---|---|---|
| OR (95% CIs) | z | case | control | I2 | |||||
| allele (A vs. G) | overall | 0.95 (0.87, 1.04) | 1.05 | 0.295 | 17 | 10,213 | 8033 | 69.9% | < 0.001 |
| Asian | 0.95 (0.87, 1.04) | 1.16 | 0.246 | 15 | 6352 | 5867 | 73.0% | < 0.001 | |
| CAD | 0.78 (0.68, 0.90) | 3.40 | 0.001 | 5 | 1934 | 1609 | 38.9% | 0.162 | |
| IS | 0.93 (0.74, 1.18) | 0.58 | 0.564 | 4 | 1515 | 1545 | 78.0% | 0.003 | |
| hypertension | 1.07 (0.99, 1.15) | 1.69 | 0.090 | 8 | 6764 | 4879 | 21.8% | 0.256 | |
| population-based | 0.92 (0.81, 1.05) | 1.26 | 0.209 | 12 | 5203 | 4584 | 73.4% | < 0.001 | |
| homozygote (AA vs. GG) | overall | 0.94 (0.76, 1.16) | 0.58 | 0.561 | 17 | 10,213 | 8033 | 64.5% | < 0.001 |
| Asian | 0.90 (0.71, 1.16) | 0.81 | 0.418 | 15 | 6352 | 5867 | 67.9% | < 0.001 | |
| CAD | 0.55 (0.39, 0.77) | 3.44 | 0.001 | 5 | 1934 | 1609 | 24.9% | 0.255 | |
| IS | 0.90 (0.56, 1.44) | 0.45 | 0.651 | 4 | 1515 | 1545 | 73.9% | 0.009 | |
| hypertension | 0.90 (1.02, 1.37) | 2.29 | 0.022 | 8 | 6764 | 4879 | 0.0% | 0.525 | |
| population-based | 0.91 (0.70, 1.19) | 0.70 | 0.487 | 12 | 5203 | 4584 | 64.3% | 0.001 | |
| heterozygote (GA vs. GG) | overall | 0.95 (0.89, 1.01) | 1.69 | 0.092 | 17 | 10,213 | 8033 | 43.9% | 0.027 |
| Asian | 0.92 (0.85, 1.00) | 2.06 | 0.039 | 15 | 6352 | 5867 | 48.3% | 0.019 | |
| CAD | 0.80 (0.69, 0.92) | 3.14 | 0.002 | 5 | 1934 | 1609 | 37.2% | 0.173 | |
| IS | 0.94 (0.80, 1.09) | 0.84 | 0.400 | 4 | 1515 | 1545 | 47.8% | 0.125 | |
| hypertension | 1.00 (0.93, 1.09) | 0.09 | 0.927 | 8 | 6764 | 4879 | 19.2% | 0.278 | |
| population-based | 0.91 (0.83, 0.99) | 2.15 | 0.032 | 12 | 5203 | 4584 | 57.8% | 0.006 | |
| dominant (GA + AA vs. GG) | overall | 0.93 (0.83, 1.03) | 1.46 | 0.145 | 17 | 10,213 | 8033 | 59.3% | 0.001 |
| Asian | 0.91 (0.80, 1.03) | 1.49 | 0.135 | 15 | 6352 | 5867 | 62.9% | 0.001 | |
| CAD | 0.77 (0.64, 0.92) | 2.83 | 0.005 | 5 | 1934 | 1609 | 43.3% | 0.133 | |
| IS | 0.93 (0.71, 1.21) | 0.57 | 0.572 | 4 | 1515 | 1545 | 69.4% | 0.020 | |
| hypertension | 1.03 (0.95, 1.12) | 0.77 | 0.442 | 8 | 6764 | 4879 | 6.0% | 0.384 | |
| population-based | 0.89 (0.77, 1.03) | 1.52 | 0.130 | 12 | 5203 | 4584 | 68.5% | < 0.001 | |
| recessive (AA vs. GG + GA) | overall | 0.98 (0.82, 1.18) | 0.22 | 0.827 | 17 | 10,213 | 8033 | 58.7% | 0.001 |
| Asian | 0.95 (0.77, 1.17) | 0.49 | 0.625 | 15 | 6352 | 5867 | 62.5% | 0.001 | |
| CAD | 0.60 (0.44, 0.83) | 3.06 | 0.002 | 5 | 1934 | 1609 | 19.2% | 0.293 | |
| IS | 0.93 (0.65, 1.33) | 0.40 | 0.692 | 4 | 1515 | 1545 | 58.8% | 0.064 | |
| hypertension | 1.22 (1.05, 1.43) | 2.52 | 0.012 | 8 | 6764 | 4879 | 12.5% | 0.333 | |
| population-based | 0.96 (0.77, 1.19) | 0.39 | 0.694 | 12 | 5203 | 4584 | 50.5% | 0.023 | |
OR odds ratio, CIs confidence intervals, CAD coronary artery disease, IS ischemic stroke, N number of case-control studies
Fig. 3Subgroup analysis by disease type of the association between the CYP4AF2 rs2108622 polymorphism and the risk of cardiovascular and cerebrovascular diseases under the allele model
The assessment of publication bias
| SNP | Comparison | Begg’s test | Egger’s test | ||
|---|---|---|---|---|---|
| z | t | ||||
| rs1558139 C/T | allele (T vs. C) | 0.89 | 0.371 | −0.19 | 0.853 |
| homozygote (TT vs. CC) | 1.07 | 0.283 | −0.74 | 0.482 | |
| heterozygote (CT vs. CC) | 0.72 | 0.474 | 0.66 | 0.526 | |
| dominant (CT + TT vs. CC) | 0.89 | 0.371 | 0.63 | 0.549 | |
| recessive (TT vs. CC + CT) | 1.07 | 0.283 | −1.33 | 0.221 | |
| rs2108622 G/A | allele (A vs. G) | 1.69 | 0.091 | −1.18 | 0.255 |
| homozygote (AA vs. GG) | 1.28 | 0.202 | −1.26 | 0.227 | |
| heterozygote (GA vs. GG) | 1.85 | 0.064 | −1.55 | 0.143 | |
| dominant (GA + AA vs. GG) | 1.11 | 0.266 | −1.18 | 0.257 | |
| recessive (AA vs. GG + GA) | 0.78 | 0.434 | 0.57 | 0.579 | |
SNP single nucleotide polymorphism
Fig. 4Begg’s test and sensitivity analysis for the CYP4AF2 rs2108622 polymorphism under the allele model. a Funnel plot of Egger's test; b Sensitivity analysis