Literature DB >> 29414795

How cells ensure correct repair of DNA double-strand breaks.

Joonyoung Her1, Samuel F Bunting2.   

Abstract

DNA double-strand breaks (DSBs) arise regularly in cells and when left unrepaired cause senescence or cell death. Homologous recombination (HR) and nonhomologous end-joining (NHEJ) are the two major DNA-repair pathways. Whereas HR allows faithful DSB repair and healthy cell growth, NHEJ has higher potential to contribute to mutations and malignancy. Many regulatory mechanisms influence which of these two pathways is used in DSB repair. These mechanisms depend on the cell cycle, post-translational modifications, and chromatin effects. Here, we summarize current research into these mechanisms, with a focus on mammalian cells, and also discuss repair by "alternative end-joining" and single-strand annealing.
© 2018 Her and Bunting.

Entities:  

Keywords:  BRCA1; DNA damage; DNA repair; chromatin; double-strand break; homologous recombination; nonhomologous end-joining; ubiquitylation (ubiquitination)

Mesh:

Year:  2018        PMID: 29414795      PMCID: PMC6036189          DOI: 10.1074/jbc.TM118.000371

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  98 in total

1.  Fine-tuning of DNA damage-dependent ubiquitination by OTUB2 supports the DNA repair pathway choice.

Authors:  Kiyoko Kato; Kazuhiro Nakajima; Ayako Ui; Yuri Muto-Terao; Hideaki Ogiwara; Shinichiro Nakada
Journal:  Mol Cell       Date:  2014-02-20       Impact factor: 17.970

2.  A mechanism for the suppression of homologous recombination in G1 cells.

Authors:  Alexandre Orthwein; Sylvie M Noordermeer; Marcus D Wilson; Sébastien Landry; Radoslav I Enchev; Alana Sherker; Meagan Munro; Jordan Pinder; Jayme Salsman; Graham Dellaire; Bing Xia; Matthias Peter; Daniel Durocher
Journal:  Nature       Date:  2015-12-09       Impact factor: 49.962

Review 3.  An Overview of the Molecular Mechanisms of Recombinational DNA Repair.

Authors:  Stephen C Kowalczykowski
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-11-02       Impact factor: 10.005

4.  Regulation of the DNA Damage Response by DNA-PKcs Inhibitory Phosphorylation of ATM.

Authors:  Yi Zhou; Ji-Hoon Lee; Wenxia Jiang; Jennie L Crowe; Shan Zha; Tanya T Paull
Journal:  Mol Cell       Date:  2016-12-08       Impact factor: 17.970

5.  REV7 counteracts DNA double-strand break resection and affects PARP inhibition.

Authors:  J Ross Chapman; Inger Brandsma; Guotai Xu; Jingsong Yuan; Martin Mistrik; Peter Bouwman; Jirina Bartkova; Ewa Gogola; Daniël Warmerdam; Marco Barazas; Janneke E Jaspers; Kenji Watanabe; Mark Pieterse; Ariena Kersbergen; Wendy Sol; Patrick H N Celie; Philip C Schouten; Bram van den Broek; Ahmed Salman; Marja Nieuwland; Iris de Rink; Jorma de Ronde; Kees Jalink; Simon J Boulton; Junjie Chen; Dik C van Gent; Jiri Bartek; Jos Jonkers; Piet Borst; Sven Rottenberg
Journal:  Nature       Date:  2015-03-23       Impact factor: 49.962

6.  Mre11 regulates CtIP-dependent double-strand break repair by interaction with CDK2.

Authors:  Jeffrey Buis; Trina Stoneham; Elizabeth Spehalski; David O Ferguson
Journal:  Nat Struct Mol Biol       Date:  2012-01-08       Impact factor: 15.369

7.  Mechanism of microhomology-mediated end-joining promoted by human DNA polymerase θ.

Authors:  Tatiana Kent; Gurushankar Chandramouly; Shane Michael McDevitt; Ahmet Y Ozdemir; Richard T Pomerantz
Journal:  Nat Struct Mol Biol       Date:  2015-02-02       Impact factor: 15.369

8.  DNA damage response factors from diverse pathways, including DNA crosslink repair, mediate alternative end joining.

Authors:  Sean M Howard; Diana A Yanez; Jeremy M Stark
Journal:  PLoS Genet       Date:  2015-01-28       Impact factor: 5.917

9.  Histone demethylase KDM5A regulates the ZMYND8-NuRD chromatin remodeler to promote DNA repair.

Authors:  Fade Gong; Thomas Clouaire; Marion Aguirrebengoa; Gaëlle Legube; Kyle M Miller
Journal:  J Cell Biol       Date:  2017-06-01       Impact factor: 10.539

10.  The interaction between CtIP and BRCA1 is not essential for resection-mediated DNA repair or tumor suppression.

Authors:  Colleen R Reczek; Matthias Szabolcs; Jeremy M Stark; Thomas Ludwig; Richard Baer
Journal:  J Cell Biol       Date:  2013-05-27       Impact factor: 10.539

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  79 in total

1.  Combined MAPK Pathway and HDAC Inhibition Breaks Melanoma.

Authors:  David B Lombard; Tomasz Cierpicki; Jolanta Grembecka
Journal:  Cancer Discov       Date:  2019-04       Impact factor: 39.397

2.  Coarse-Grained Simulations of DNA Reveal Angular Dependence of Sticky-End Binding.

Authors:  Nicholas M Gravina; James C Gumbart; Harold D Kim
Journal:  J Phys Chem B       Date:  2021-04-19       Impact factor: 2.991

3.  Stitching up broken DNA ends by FANCA.

Authors:  Anna Palovcak; Wenjun Liu; Fenghua Yuan; Yanbin Zhang
Journal:  Mol Cell Oncol       Date:  2018-09-25

Review 4.  Introduction to the Thematic Minireview Series: DNA double-strand break repair and pathway choice.

Authors:  Patrick Sung
Journal:  J Biol Chem       Date:  2018-05-31       Impact factor: 5.157

5.  Predicting the mutations generated by repair of Cas9-induced double-strand breaks.

Authors:  Felicity Allen; Luca Crepaldi; Clara Alsinet; Alexander J Strong; Vitalii Kleshchevnikov; Pietro De Angeli; Petra Páleníková; Anton Khodak; Vladimir Kiselev; Michael Kosicki; Andrew R Bassett; Heather Harding; Yaron Galanty; Francisco Muñoz-Martínez; Emmanouil Metzakopian; Stephen P Jackson; Leopold Parts
Journal:  Nat Biotechnol       Date:  2018-11-27       Impact factor: 54.908

6.  A DNA nick at Ku-blocked double-strand break ends serves as an entry site for exonuclease 1 (Exo1) or Sgs1-Dna2 in long-range DNA end resection.

Authors:  Weibin Wang; James M Daley; Youngho Kwon; Xiaoyu Xue; Danielle S Krasner; Adam S Miller; Kevin A Nguyen; Elizabeth A Williamson; Eun Yong Shim; Sang Eun Lee; Robert Hromas; Patrick Sung
Journal:  J Biol Chem       Date:  2018-09-17       Impact factor: 5.157

Review 7.  RAD51 Gene Family Structure and Function.

Authors:  Braulio Bonilla; Sarah R Hengel; McKenzie K Grundy; Kara A Bernstein
Journal:  Annu Rev Genet       Date:  2020-07-14       Impact factor: 16.830

Review 8.  Homologous recombination and the repair of DNA double-strand breaks.

Authors:  William Douglass Wright; Shanaya Shital Shah; Wolf-Dietrich Heyer
Journal:  J Biol Chem       Date:  2018-03-29       Impact factor: 5.157

9.  Impeding the single-strand annealing pathway of DNA double-strand break repair by withaferin A-mediated FANCA degradation.

Authors:  Wenjun Liu; Guanying Wang; Anna Palovcak; Yan Li; Sophie Hao; Zhao-Jun Liu; Ralf Landgraf; Fenghua Yuan; Yanbin Zhang
Journal:  DNA Repair (Amst)       Date:  2019-02-27

Review 10.  Heat-shock proteins: chaperoning DNA repair.

Authors:  Laurence Dubrez; Sébastien Causse; Natalia Borges Bonan; Baptiste Dumétier; Carmen Garrido
Journal:  Oncogene       Date:  2019-09-20       Impact factor: 9.867

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