Literature DB >> 29396746

Ribosome engineering and fermentation optimization leads to overproduction of tiancimycin A, a new enediyne natural product from Streptomyces sp. CB03234.

Ling Liu1, Jian Pan1, Zilong Wang1, Xiaohui Yan2, Dong Yang2, Xiangcheng Zhu1,3,4, Ben Shen2,5,6, Yanwen Duan7,8,9,10, Yong Huang11,12,13.   

Abstract

Tiancimycin (TNM) A, a recently discovered enediyne natural product from Streptomyces sp. CB03234, showed rapid and complete killing of cancer cells and could be used as a payload in antibody drug conjugates. The low yield of TNM A in the wild-type strain promoted us to use ribosome engineering and fermentation optimization for its yield improvement. The Streptomyces sp. CB03234-R-16 mutant strain with a L422P mutation in RpoB, the RNA polymerase β-subunit, was obtained from the rifamycin-resistant screening. After fermentation optimization, the titers of TNM A in Streptomyces sp. CB03234-R-16 reached to 22.5 ± 3.1 mg L-1 in shaking flasks, and 13 ± 1 mg L-1 in 15 L fermentors, which were at least 40-fold higher than that in the wild-type strain (~ 0.3 mg L-1). Quantitative real-time RT-PCR revealed markedly enhanced expression of key genes encoding TNM A biosynthetic enzymes and regulators in Streptomyces sp. CB03234-R-16. Our study should greatly facilitate the future efforts to develop TNM A into a clinical anticancer drug.

Entities:  

Keywords:  Enediyne natural product; In situ resin adsorption; Ribosome engineering; RpoB; Tiancimycin A

Mesh:

Substances:

Year:  2018        PMID: 29396746      PMCID: PMC6211294          DOI: 10.1007/s10295-018-2014-8

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN: 1367-5435            Impact factor:   3.346


  43 in total

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Authors:  M L Heathcote; J Staunton; P F Leadlay
Journal:  Chem Biol       Date:  2001-02

2.  Thioesterases and the premature termination of polyketide chain elongation in rifamycin B biosynthesis by Amycolatopsis mediterranei S699.

Authors:  Y Doi-Katayama; Y J Yoon; C Y Choi; T W Yu; H G Floss; C R Hutchinson
Journal:  J Antibiot (Tokyo)       Date:  2000-05       Impact factor: 2.649

Review 3.  Acute Myeloid Leukemia.

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Journal:  N Engl J Med       Date:  2015-09-17       Impact factor: 91.245

Review 4.  Combinatorial engineering of microbes for optimizing cellular phenotype.

Authors:  Christine Nicole S Santos; Gregory Stephanopoulos
Journal:  Curr Opin Chem Biol       Date:  2008-02-29       Impact factor: 8.822

Review 5.  Insights into microbial cryptic gene activation and strain improvement: principle, application and technical aspects.

Authors:  Kozo Ochi
Journal:  J Antibiot (Tokyo)       Date:  2016-07-06       Impact factor: 2.649

6.  Streamlined Total Synthesis of Uncialamycin and Its Application to the Synthesis of Designed Analogues for Biological Investigations.

Authors:  K C Nicolaou; Yanping Wang; Min Lu; Debashis Mandal; Manas R Pattanayak; Ruocheng Yu; Akshay A Shah; Jason S Chen; Hongjun Zhang; James J Crawford; Laxman Pasunoori; Yam B Poudel; Naidu S Chowdari; Chin Pan; Ayesha Nazeer; Sanjeev Gangwar; Gregory Vite; Emmanuel N Pitsinos
Journal:  J Am Chem Soc       Date:  2016-06-27       Impact factor: 15.419

7.  Dramatic activation of antibiotic production in Streptomyces coelicolor by cumulative drug resistance mutations.

Authors:  Guojun Wang; Takeshi Hosaka; Kozo Ochi
Journal:  Appl Environ Microbiol       Date:  2008-02-29       Impact factor: 4.792

8.  Improved processes for the production and isolation of dynemicin A and large-scale fermentation in a 10,000-liter fermentor.

Authors:  K S Lam; J A Titus; T T Dabrah; D L Kimball; J M Veitch; D R Gustavson; B J Compton; J A Matson; S Forenza; J Ross
Journal:  J Ind Microbiol       Date:  1992-11

Review 9.  Enediyne natural products: biosynthesis and prospect towards engineering novel antitumor agents.

Authors:  Ben Shen; Wen Liu; Koichi Nonaka
Journal:  Curr Med Chem       Date:  2003-11       Impact factor: 4.530

10.  Gemtuzumab Ozogamicin Versus Best Supportive Care in Older Patients With Newly Diagnosed Acute Myeloid Leukemia Unsuitable for Intensive Chemotherapy: Results of the Randomized Phase III EORTC-GIMEMA AML-19 Trial.

Authors:  Sergio Amadori; Stefan Suciu; Dominik Selleslag; Franco Aversa; Gianluca Gaidano; Maurizio Musso; Luciana Annino; Adriano Venditti; Maria Teresa Voso; Carla Mazzone; Domenico Magro; Paolo De Fabritiis; Petra Muus; Giuliana Alimena; Marco Mancini; Anne Hagemeijer; Francesca Paoloni; Marco Vignetti; Paola Fazi; Liv Meert; Safaa Mahmoud Ramadan; Roel Willemze; Theo de Witte; Frédéric Baron
Journal:  J Clin Oncol       Date:  2016-01-25       Impact factor: 44.544

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  12 in total

1.  Late-Stage Functionalization of Platensimycin Leading to Multiple Analogues with Improved Antibacterial Activity in Vitro and in Vivo.

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Journal:  J Med Chem       Date:  2019-07-02       Impact factor: 7.446

2.  Comparative Studies of the Biosynthetic Gene Clusters for Anthraquinone-Fused Enediynes Shedding Light into the Tailoring Steps of Tiancimycin Biosynthesis.

Authors:  Xiaohui Yan; Jian-Jun Chen; Ajeeth Adhikari; Christiana N Teijaro; Huiming Ge; Ivana Crnovcic; Chin-Yuan Chang; Thibault Annaval; Dong Yang; Christoph Rader; Ben Shen
Journal:  Org Lett       Date:  2018-09-13       Impact factor: 6.005

3.  Sequential improvement of rimocidin production in Streptomyces rimosus M527 by introduction of cumulative drug-resistance mutations.

Authors:  Yanfang Zhao; Zhangqing Song; Zheng Ma; Andreas Bechthold; Xiaoping Yu
Journal:  J Ind Microbiol Biotechnol       Date:  2019-01-29       Impact factor: 3.346

4.  The intricate molecular identification of Streptomyces: a case study on Antarctic soil isolates.

Authors:  Marcela Proença Borba; Ana Paula da Silva Ferrero; Renata de Souza Lameira; Sueli Teresinha Van Der Sand
Journal:  Arch Microbiol       Date:  2022-07-13       Impact factor: 2.667

5.  Yangpumicins F and G, Enediyne Congeners from Micromonospora yangpuensis DSM 45577.

Authors:  Zilong Wang; Zhongqing Wen; Ling Liu; Xiangcheng Zhu; Ben Shen; Xiaohui Yan; Yanwen Duan; Yong Huang
Journal:  J Nat Prod       Date:  2019-09-06       Impact factor: 4.050

6.  Characterization of TnmH as an O-Methyltransferase Revealing Insights into Tiancimycin Biosynthesis and Enabling a Biocatalytic Strategy To Prepare Antibody-Tiancimycin Conjugates.

Authors:  Ajeeth Adhikari; Christiana N Teijaro; Xiaohui Yan; Chin-Yuan Chang; Chun Gui; Yu-Chen Liu; Ivana Crnovcic; Dong Yang; Thibault Annaval; Christoph Rader; Ben Shen
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Review 7.  Targeting Bacterial Genomes for Natural Product Discovery.

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Journal:  Trends Pharmacol Sci       Date:  2019-12-07       Impact factor: 14.819

8.  Submerged fermentation of Streptomyces uncialis providing a biotechnology platform for uncialamycin biosynthesis, engineering, and production.

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Journal:  J Ind Microbiol Biotechnol       Date:  2021-06-04       Impact factor: 4.258

9.  The Antitumor Agent Ansamitocin P-3 Binds to Cell Division Protein FtsZ in Actinosynnema pretiosum.

Authors:  Xinran Wang; Rufan Wang; Qianjin Kang; Linquan Bai
Journal:  Biomolecules       Date:  2020-04-30

Review 10.  The Application of Ribosome Engineering to Natural Product Discovery and Yield Improvement in Streptomyces.

Authors:  Saibin Zhu; Yanwen Duan; Yong Huang
Journal:  Antibiotics (Basel)       Date:  2019-08-30
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