Literature DB >> 29393646

Can Stereoclusters Separated by Two Methylene Groups Be Related by DFT Studies? The Case of the Cytotoxic Meroditerpenes Halioxepines.

Guillermo Tarazona1, Gonzalo Benedit1, Rogelio Fernández1, Marta Pérez1, Jaime Rodríguez2, Carlos Jiménez2, Carmen Cuevas1.   

Abstract

QM/NMR-DFT (quantum mechanics combined with nuclear magnetic resonance parameters calculated by density functional theory approximations) studies allowed us to link two stereoclusters separated by two methylene groups present in the new meroditerpenes halioxepine B (2) and halioxepine C (3) and the known halioxepine (1), isolated from two Indonesian sponges of the genus Haliclona (Reniera). DP4 and DP4+ probabilities were used to discriminate the two diastereotopic arrangements of the two stereoclusters, whose unconnected relative configurations were determined by ROESY and J-based configurational analysis. To confirm the DFT studies, the full relative configuration of 1 was deduced using a mixture of benzene-d6 and pyridine-d5 as the NMR solvent. ROESY measurements connected the two stereoclusters and demonstrated that DFT calculations accurately predict the configuration when two methylenes separate the two stereoclusters. The different arrangements of the distant stereoclusters C-1/C-2/C-7 and C-10/C-15 for compounds 2 and 3 were deduced by DFT calculations and explained the opposite optical rotations observed for the two compounds. Halioxepines B (2) and C (3) display moderate cytotoxicity against different human cancer cell lines.

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Year:  2018        PMID: 29393646     DOI: 10.1021/acs.jnatprod.7b00807

Source DB:  PubMed          Journal:  J Nat Prod        ISSN: 0163-3864            Impact factor:   4.050


  8 in total

Review 1.  Computationally-assisted discovery and structure elucidation of natural products.

Authors:  Alfarius Eko Nugroho; Hiroshi Morita
Journal:  J Nat Med       Date:  2019-05-15       Impact factor: 2.343

2.  Cytotoxic Furanoditerpenes from the Sponge Spongia tubulifera Collected in the Mexican Caribbean.

Authors:  Dawrin Pech-Puch; Jaime Rodríguez; Bastien Cautain; Carlos Alfredo Sandoval-Castro; Carlos Jiménez
Journal:  Mar Drugs       Date:  2019-07-16       Impact factor: 5.118

3.  Two New Neo-debromoaplysiatoxins-A Pair of Stereoisomers Exhibiting Potent Kv1.5 Ion Channel Inhibition Activities.

Authors:  Ting-Ting Fan; Hui-Hui Zhang; Yang-Hua Tang; Fan-Zhong Zhang; Bing-Nan Han
Journal:  Mar Drugs       Date:  2019-11-21       Impact factor: 5.118

Review 4.  Natural Products from the Marine Sponge Subgenus Reniera.

Authors:  Xuelian Bai; Yang Liu; Hao Wang; Huawei Zhang
Journal:  Molecules       Date:  2021-02-19       Impact factor: 4.411

5.  Towards Elucidating Structure-Spectra Relationships in Rhamnogalacturonan II: Computational Protocols for Accurate 13C and 1H Shifts for Apiose and Its Borate Esters.

Authors:  Vivek S Bharadwaj; Luke P Westawker; Michael F Crowley
Journal:  Front Mol Biosci       Date:  2022-01-24

6.  DFT Calculations of 1H- and 13C-NMR Chemical Shifts of Geometric Isomers of Conjugated Linoleic Acid (18:2 ω-7) and Model Compounds in Solution.

Authors:  Themistoklis Venianakis; Christina Oikonomaki; Michael G Siskos; Panayiotis C Varras; Alexandra Primikyri; Eleni Alexandri; Ioannis P Gerothanassis
Journal:  Molecules       Date:  2020-08-11       Impact factor: 4.411

7.  NMR and Computational Studies as Analytical and High-Resolution Structural Tool for Complex Hydroperoxides and Diastereomeric Endo-Hydroperoxides of Fatty Acids in Solution-Exemplified by Methyl Linolenate.

Authors:  Raheel Ahmed; Panayiotis C Varras; Michael G Siskos; Hina Siddiqui; M Iqbal Choudhary; Ioannis P Gerothanassis
Journal:  Molecules       Date:  2020-10-23       Impact factor: 4.411

Review 8.  Recent Achievements in Total Synthesis for Integral Structural Revisions of Marine Natural Products.

Authors:  Min Woo Ha; Jonghoon Kim; Seung-Mann Paek
Journal:  Mar Drugs       Date:  2022-02-25       Impact factor: 5.118

  8 in total

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