Literature DB >> 29377012

Widespread bacterial protein histidine phosphorylation revealed by mass spectrometry-based proteomics.

Clement M Potel1,2, Miao-Hsia Lin1,2, Albert J R Heck1,2, Simone Lemeer1,2.   

Abstract

For decades, major difficulties in analyzing histidine phosphorylation have limited the study of phosphohistidine signaling. Here we report a method revealing widespread and abundant protein histidine phosphorylation in Escherichia coli. We generated an extensive E. coli phosphoproteome data set, in which a remarkably high percentage (∼10%) of phosphorylation sites are phosphohistidine sites. This resource should help enable a better understanding of the biological function of histidine phosphorylation.

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Year:  2018        PMID: 29377012     DOI: 10.1038/nmeth.4580

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  27 in total

1.  Identification of phosphohistidine in digests from a probable intermediate of oxidative phosphorylation.

Authors:  P D BOYER; M DELUCA; K E EBNER; D E HULTQUIST; J B PETER
Journal:  J Biol Chem       Date:  1962-10       Impact factor: 5.157

2.  Systematic profiling of the bacterial phosphoproteome reveals bacterium-specific features of phosphorylation.

Authors:  Miao-Hsia Lin; Naoyuki Sugiyama; Yasushi Ishihama
Journal:  Sci Signal       Date:  2015-09-15       Impact factor: 8.192

3.  Immunoaffinity profiling of tyrosine phosphorylation in cancer cells.

Authors:  John Rush; Albrecht Moritz; Kimberly A Lee; Ailan Guo; Valerie L Goss; Erik J Spek; Hui Zhang; Xiang-Ming Zha; Roberto D Polakiewicz; Michael J Comb
Journal:  Nat Biotechnol       Date:  2004-12-12       Impact factor: 54.908

4.  Mass spectrometric analysis of protein histidine phosphorylation.

Authors:  X-L Zu; P G Besant; A Imhof; P V Attwood
Journal:  Amino Acids       Date:  2007-02-28       Impact factor: 3.520

Review 5.  Specificity in two-component signal transduction pathways.

Authors:  Michael T Laub; Mark Goulian
Journal:  Annu Rev Genet       Date:  2007       Impact factor: 16.830

6.  Identification of phosphohistidine in proteins and purification of protein-histidine kinases.

Authors:  Y F Wei; H R Matthews
Journal:  Methods Enzymol       Date:  1991       Impact factor: 1.600

7.  The MaxQuant computational platform for mass spectrometry-based shotgun proteomics.

Authors:  Stefka Tyanova; Tikira Temu; Juergen Cox
Journal:  Nat Protoc       Date:  2016-10-27       Impact factor: 13.491

Review 8.  Protein kinases and phosphatases: the yin and yang of protein phosphorylation and signaling.

Authors:  T Hunter
Journal:  Cell       Date:  1995-01-27       Impact factor: 41.582

9.  Building ProteomeTools based on a complete synthetic human proteome.

Authors:  Daniel P Zolg; Mathias Wilhelm; Karsten Schnatbaum; Johannes Zerweck; Tobias Knaute; Bernard Delanghe; Derek J Bailey; Siegfried Gessulat; Hans-Christian Ehrlich; Maximilian Weininger; Peng Yu; Judith Schlegl; Karl Kramer; Tobias Schmidt; Ulrike Kusebauch; Eric W Deutsch; Ruedi Aebersold; Robert L Moritz; Holger Wenschuh; Thomas Moehring; Stephan Aiche; Andreas Huhmer; Ulf Reimer; Bernhard Kuster
Journal:  Nat Methods       Date:  2017-01-30       Impact factor: 28.547

10.  A phosphohistidine proteomics strategy based on elucidation of a unique gas-phase phosphopeptide fragmentation mechanism.

Authors:  Rob C Oslund; Jung-Min Kee; Anthony D Couvillon; Vivek N Bhatia; David H Perlman; Tom W Muir
Journal:  J Am Chem Soc       Date:  2014-09-08       Impact factor: 15.419

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  29 in total

1.  A New Tool to Reveal Bacterial Signaling Mechanisms in Antibiotic Treatment and Resistance.

Authors:  Miao-Hsia Lin; Clement M Potel; Kamaleddin H M E Tehrani; Albert J R Heck; Nathaniel I Martin; Simone Lemeer
Journal:  Mol Cell Proteomics       Date:  2018-09-19       Impact factor: 5.911

2.  Escherichia coli Lrp Regulates One-Third of the Genome via Direct, Cooperative, and Indirect Routes.

Authors:  Grace M Kroner; Michael B Wolfe; Peter L Freddolino
Journal:  J Bacteriol       Date:  2019-01-11       Impact factor: 3.490

3.  Relative Quantification of Phosphorylated and Glycosylated Peptides from the Same Sample Using Isobaric Chemical Labelling with a Two-Step Enrichment Strategy.

Authors:  Ivan Silbern; Pan Fang; Yanlong Ji; Lenz Christof; Henning Urlaub; Kuan-Ting Pan
Journal:  Methods Mol Biol       Date:  2021

4.  Bioinspired Thiophosphorodichloridate Reagents for Chemoselective Histidine Bioconjugation.

Authors:  Shang Jia; Dan He; Christopher J Chang
Journal:  J Am Chem Soc       Date:  2019-04-24       Impact factor: 15.419

Review 5.  Strategies for mass spectrometry-based phosphoproteomics using isobaric tagging.

Authors:  Xinyue Liu; Rose Fields; Devin K Schweppe; Joao A Paulo
Journal:  Expert Rev Proteomics       Date:  2021-10-28       Impact factor: 3.940

Review 6.  A journey from phosphotyrosine to phosphohistidine and beyond.

Authors:  Tony Hunter
Journal:  Mol Cell       Date:  2022-06-01       Impact factor: 19.328

7.  Phosphorylation of human placental aromatase CYP19A1.

Authors:  Debashis Ghosh; Chinaza Egbuta; Jean E Kanyo; TuKiet T Lam
Journal:  Biochem J       Date:  2019-11-15       Impact factor: 3.857

Review 8.  Advances in quantitative high-throughput phosphoproteomics with sample multiplexing.

Authors:  Joao A Paulo; Devin K Schweppe
Journal:  Proteomics       Date:  2021-03-30       Impact factor: 3.984

9.  Mechanistic Studies of Bioorthogonal ATP Analogues for Assessment of Histidine Kinase Autophosphorylation.

Authors:  Adeline Espinasse; Xuelan Wen; Jason D Goodpaster; Erin E Carlson
Journal:  ACS Chem Biol       Date:  2020-02-24       Impact factor: 5.100

10.  A Two-Dimensional Metallacycle Cross-Linked Switchable Polymer for Fast and Highly Efficient Phosphorylated Peptide Enrichment.

Authors:  Li-Jun Chen; Sean J Humphrey; Jun-Long Zhu; Fan-Fan Zhu; Xu-Qing Wang; Xiang Wang; Jin Wen; Hai-Bo Yang; Philip A Gale
Journal:  J Am Chem Soc       Date:  2021-05-27       Impact factor: 15.419

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