Literature DB >> 29372905

Production, biophysical characterization and initial crystallization studies of the N- and C-terminal domains of DsbD, an essential enzyme in Neisseria meningitidis.

Roxanne P Smith1, Andrew E Whitten2, Jason J Paxman1, Charlene M Kahler3, Martin J Scanlon4, Begoña Heras1.   

Abstract

The membrane protein DsbD is a reductase that acts as an electron hub, translocating reducing equivalents from cytoplasmic thioredoxin to a number of periplasmic substrates involved in oxidative protein folding, cytochrome c maturation and oxidative stress defence. DsbD is a multi-domain protein consisting of a transmembrane domain (t-DsbD) flanked by two periplasmic domains (n-DsbD and c-DsbD). Previous studies have shown that DsbD is required for the survival of the obligate human pathogen Neisseria meningitidis. To help understand the structural and functional aspects of N. meningitidis DsbD, the two periplasmic domains which are required for electron transfer are being studied. Here, the expression, purification and biophysical properties of n-NmDsbD and c-NmDsbD are described. The crystallization and crystallographic analysis of n-NmDsbD and c-NmDsbD are also described in both redox states, which differ only in the presence or absence of a disulfide bond but which crystallized in completely different conditions. Crystals of n-NmDsbDOx, n-NmDsbDRed, c-NmDsbDOx and c-NmDsbDRed diffracted to 2.3, 1.6, 2.3 and 1.7 Å resolution and belonged to space groups P213, P321, P41 and P1211, respectively.

Entities:  

Keywords:  DsbD; Neisseria meningitidis; disulfide catalysis; membrane proteins

Mesh:

Substances:

Year:  2018        PMID: 29372905      PMCID: PMC5947690          DOI: 10.1107/S2053230X17017800

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  34 in total

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Journal:  Biophys J       Date:  1999-06       Impact factor: 4.033

2.  Crystal structure of DsbDgamma reveals the mechanism of redox potential shift and substrate specificity(1).

Authors:  Jae Hoon Kim; Seung Jun Kim; Dae Gwin Jeong; Jeong Hee Son; Seong Eon Ryu
Journal:  FEBS Lett       Date:  2003-05-22       Impact factor: 4.124

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4.  Structural basis and kinetics of inter- and intramolecular disulfide exchange in the redox catalyst DsbD.

Authors:  Anna Rozhkova; Christian U Stirnimann; Patrick Frei; Ulla Grauschopf; René Brunisholz; Markus G Grütter; Guido Capitani; Rudi Glockshuber
Journal:  EMBO J       Date:  2004-04-01       Impact factor: 11.598

Review 5.  DSB proteins and bacterial pathogenicity.

Authors:  Begoña Heras; Stephen R Shouldice; Makrina Totsika; Martin J Scanlon; Mark A Schembri; Jennifer L Martin
Journal:  Nat Rev Microbiol       Date:  2009-02-09       Impact factor: 60.633

6.  Reduction of the periplasmic disulfide bond isomerase, DsbC, occurs by passage of electrons from cytoplasmic thioredoxin.

Authors:  A Rietsch; P Bessette; G Georgiou; J Beckwith
Journal:  J Bacteriol       Date:  1997-11       Impact factor: 3.490

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Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

8.  A family of LIC vectors for high-throughput cloning and purification of proteins.

Authors:  William H Eschenfeldt; Stols Lucy; Cynthia Sanville Millard; Andrzej Joachimiak; I Donnelly Mark
Journal:  Methods Mol Biol       Date:  2009

Review 9.  Many roles of the bacterial envelope reducing pathways.

Authors:  Seung-Hyun Cho; Jean-Francois Collet
Journal:  Antioxid Redox Signal       Date:  2012-11-06       Impact factor: 8.401

10.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18
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  1 in total

1.  Structural and biochemical insights into the disulfide reductase mechanism of DsbD, an essential enzyme for neisserial pathogens.

Authors:  Roxanne P Smith; Biswaranjan Mohanty; Shakeel Mowlaboccus; Jason J Paxman; Martin L Williams; Stephen J Headey; Geqing Wang; Pramod Subedi; Bradley C Doak; Charlene M Kahler; Martin J Scanlon; Begoña Heras
Journal:  J Biol Chem       Date:  2018-09-04       Impact factor: 5.157

  1 in total

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