Literature DB >> 29367151

A New Classification of the Dictyostelids.

Sanea Sheikh1, Mats Thulin1, James C Cavender2, Ricardo Escalante3, Shin-Ichi Kawakami4, Carlos Lado5, John C Landolt6, Vidyanand Nanjundiah7, David C Queller8, Joan E Strassmann8, Frederick W Spiegel9, Steven L Stephenson9, Eduardo M Vadell10, Sandra L Baldauf11.   

Abstract

Traditional morphology-based taxonomy of dictyostelids is rejected by molecular phylogeny. A new classification is presented based on monophyletic entities with consistent and strong molecular phylogenetic support and that are, as far as possible, morphologically recognizable. All newly named clades are diagnosed with small subunit ribosomal RNA (18S rRNA) sequence signatures plus morphological synapomorphies where possible. The two major molecular clades are given the rank of order, as Acytosteliales ord. nov. and Dictyosteliales. The two major clades within each of these orders are recognized and given the rank of family as, respectively, Acytosteliaceae and Cavenderiaceae fam. nov. in Acytosteliales, and Dictyosteliaceae and Raperosteliaceae fam. nov. in Dictyosteliales. Twelve genera are recognized: Cavenderia gen. nov. in Cavenderiaceae, Acytostelium, Rostrostelium gen. nov. and Heterostelium gen. nov. in Acytosteliaceae, Tieghemostelium gen. nov., Hagiwaraea gen. nov., Raperostelium gen. nov. and Speleostelium gen. nov. in Raperosteliaceae, and Dictyostelium and Polysphondylium in Dictyosteliaceae. The "polycephalum" complex is treated as Coremiostelium gen. nov. (not assigned to family) and the "polycarpum" complex as Synstelium gen. nov. (not assigned to order and family). Coenonia, which may not be a dictyostelid, is treated as a genus incertae sedis. Eighty-eight new combinations are made at species and variety level, and Dictyostelium ammophilum is validated.
Copyright © 2017 Elsevier GmbH. All rights reserved.

Entities:  

Keywords:  Classification; dictyostelids; molecular characters; nomenclature; phylogeny; taxonomy.

Mesh:

Substances:

Year:  2017        PMID: 29367151     DOI: 10.1016/j.protis.2017.11.001

Source DB:  PubMed          Journal:  Protist        ISSN: 1434-4610


  16 in total

1.  Four New Species of Dictyostelids from Soil Systems in Northern Thailand.

Authors:  James C Cavender; Eduardo M Vadell; Allison L Perrigo; John C Landolt; Steven L Stephenson; Pu Liu
Journal:  J Fungi (Basel)       Date:  2022-05-31

2.  Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes.

Authors:  Sina M Adl; David Bass; Christopher E Lane; Julius Lukeš; Conrad L Schoch; Alexey Smirnov; Sabine Agatha; Cedric Berney; Matthew W Brown; Fabien Burki; Paco Cárdenas; Ivan Čepička; Lyudmila Chistyakova; Javier Del Campo; Micah Dunthorn; Bente Edvardsen; Yana Eglit; Laure Guillou; Vladimír Hampl; Aaron A Heiss; Mona Hoppenrath; Timothy Y James; Anna Karnkowska; Sergey Karpov; Eunsoo Kim; Martin Kolisko; Alexander Kudryavtsev; Daniel J G Lahr; Enrique Lara; Line Le Gall; Denis H Lynn; David G Mann; Ramon Massana; Edward A D Mitchell; Christine Morrow; Jong Soo Park; Jan W Pawlowski; Martha J Powell; Daniel J Richter; Sonja Rueckert; Lora Shadwick; Satoshi Shimano; Frederick W Spiegel; Guifré Torruella; Noha Youssef; Vasily Zlatogursky; Qianqian Zhang
Journal:  J Eukaryot Microbiol       Date:  2019-01       Impact factor: 3.346

3.  New light on names and naming of dark taxa.

Authors:  Martin Ryberg; R Henrik Nilsson
Journal:  MycoKeys       Date:  2018-02-23       Impact factor: 2.984

4.  Loss of the Polyketide Synthase StlB Results in Stalk Cell Overproduction in Polysphondylium violaceum.

Authors:  Takaaki B Narita; Yoshinori Kawabe; Koryu Kin; Richard A Gibbs; Adam Kuspa; Donna M Muzny; Stephen Richards; Joan E Strassmann; Richard Sucgang; Kim C Worley; Pauline Schaap
Journal:  Genome Biol Evol       Date:  2020-05-01       Impact factor: 3.416

5.  Cold climate adaptation is a plausible cause for evolution of multicellular sporulation in Dictyostelia.

Authors:  Hajara M Lawal; Christina Schilde; Koryu Kin; Matthew W Brown; John James; Alan R Prescott; Pauline Schaap
Journal:  Sci Rep       Date:  2020-05-29       Impact factor: 4.379

6.  Dictyostelid Cellular Slime Molds from Christmas Island, Indian Ocean.

Authors:  Pu Liu; Yue Zou; Wenxiu Li; Yu Li; Xinru Li; Songhao Che; Steven L Stephenson
Journal:  mSphere       Date:  2019-04-10       Impact factor: 4.389

7.  A well supported multi gene phylogeny of 52 dictyostelia.

Authors:  Christina Schilde; Hajara M Lawal; Koryu Kin; Ikumi Shibano-Hayakawa; Kei Inouye; Pauline Schaap
Journal:  Mol Phylogenet Evol       Date:  2019-01-31       Impact factor: 4.286

8.  Cell-type specific RNA-Seq reveals novel roles and regulatory programs for terminally differentiated Dictyostelium cells.

Authors:  Koryu Kin; Gillian Forbes; Andrew Cassidy; Pauline Schaap
Journal:  BMC Genomics       Date:  2018-10-22       Impact factor: 3.969

Review 9.  Unfolding the Endoplasmic Reticulum of a Social Amoeba: Dictyostelium discoideum as a New Model for the Study of Endoplasmic Reticulum Stress.

Authors:  Eunice Domínguez-Martín; Mariana Hernández-Elvira; Olivier Vincent; Roberto Coria; Ricardo Escalante
Journal:  Cells       Date:  2018-06-10       Impact factor: 6.600

10.  Comparative genomics of nuclear envelope proteins.

Authors:  Hita Sony Garapati; Krishnaveni Mishra
Journal:  BMC Genomics       Date:  2018-11-16       Impact factor: 3.969

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