Literature DB >> 29356938

Reconstructing the demographic history of the Himalayan and adjoining populations.

Rakesh Tamang1,2,3,4, Gyaneshwer Chaubey5,6, Amrita Nandan4, Periyasamy Govindaraj4,7, Vipin Kumar Singh4, Niraj Rai4,8, Chandana Basu Mallick9,10, Vishwas Sharma4, Varun Kumar Sharma4, Anish M Shah4, Albert Lalremruata4, Alla G Reddy4, Deepa Selvi Rani4, Pilot Doviah4, Neetu Negi11, Yarin Hadid12, Veena Pande11, Satti Vishnupriya2, George van Driem13, Doron M Behar9, Tikaram Sharma14, Lalji Singh4,15, Richard Villems3,9, Kumarasamy Thangaraj16.   

Abstract

The rugged topography of the Himalayan region has hindered large-scale human migrations, population admixture and assimilation. Such complexity in geographical structure might have facilitated the existence of several small isolated communities in this region. We have genotyped about 850,000 autosomal markers among 35 individuals belonging to the four major populations inhabiting the Himalaya and adjoining regions. In addition, we have genotyped 794 individuals belonging to 16 ethnic groups from the same region, for uniparental (mitochondrial and Y chromosomal DNA) markers. Our results in the light of various statistical analyses suggest a closer link of the Himalayan and adjoining populations to East Asia than their immediate geographical neighbours in South Asia. Allele frequency-based analyses likely support the existence of a specific ancestry component in the Himalayan and adjoining populations. The admixture time estimate suggests a recent westward migration of populations living to the East of the Himalaya. Furthermore, the uniparental marker analysis among the Himalayan and adjoining populations reveal the presence of East, Southeast and South Asian genetic signatures. Interestingly, we observed an antagonistic association of Y chromosomal haplogroups O3 and D clines with the longitudinal distance. Thus, we summarise that studying the Himalayan and adjoining populations is essential for a comprehensive reconstruction of the human evolutionary and ethnolinguistic history of eastern Eurasia.

Entities:  

Mesh:

Substances:

Year:  2018        PMID: 29356938     DOI: 10.1007/s00439-018-1867-2

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  44 in total

1.  Shared and unique components of human population structure and genome-wide signals of positive selection in South Asia.

Authors:  Mait Metspalu; Irene Gallego Romero; Bayazit Yunusbayev; Gyaneshwer Chaubey; Chandana Basu Mallick; Georgi Hudjashov; Mari Nelis; Reedik Mägi; Ene Metspalu; Maido Remm; Ramasamy Pitchappan; Lalji Singh; Kumarasamy Thangaraj; Richard Villems; Toomas Kivisild
Journal:  Am J Hum Genet       Date:  2011-12-09       Impact factor: 11.025

2.  A mitochondrial revelation of early human migrations to the Tibetan Plateau before and after the last glacial maximum.

Authors:  Zhendong Qin; Yajun Yang; Longli Kang; Shi Yan; Kelly Cho; Xiaoyun Cai; Yan Lu; Hongxiang Zheng; Dongchen Zhu; Dongmei Fei; Shilin Li; Li Jin; Hui Li
Journal:  Am J Phys Anthropol       Date:  2010-12       Impact factor: 2.868

3.  A draft sequence of the Neandertal genome.

Authors:  Johannes Krause; Adrian W Briggs; Tomislav Maricic; Udo Stenzel; Martin Kircher; Nick Patterson; Richard E Green; Heng Li; Weiwei Zhai; Markus Hsi-Yang Fritz; Nancy F Hansen; Eric Y Durand; Anna-Sapfo Malaspinas; Jeffrey D Jensen; Tomas Marques-Bonet; Can Alkan; Kay Prüfer; Matthias Meyer; Hernán A Burbano; Jeffrey M Good; Rigo Schultz; Ayinuer Aximu-Petri; Anne Butthof; Barbara Höber; Barbara Höffner; Madlen Siegemund; Antje Weihmann; Chad Nusbaum; Eric S Lander; Carsten Russ; Nathaniel Novod; Jason Affourtit; Michael Egholm; Christine Verna; Pavao Rudan; Dejana Brajkovic; Željko Kucan; Ivan Gušic; Vladimir B Doronichev; Liubov V Golovanova; Carles Lalueza-Fox; Marco de la Rasilla; Javier Fortea; Antonio Rosas; Ralf W Schmitz; Philip L F Johnson; Evan E Eichler; Daniel Falush; Ewan Birney; James C Mullikin; Montgomery Slatkin; Rasmus Nielsen; Janet Kelso; Michael Lachmann; David Reich; Svante Pääbo
Journal:  Science       Date:  2010-05-07       Impact factor: 47.728

4.  Sequencing of 50 human exomes reveals adaptation to high altitude.

Authors:  Xin Yi; Yu Liang; Emilia Huerta-Sanchez; Xin Jin; Zha Xi Ping Cuo; John E Pool; Xun Xu; Hui Jiang; Nicolas Vinckenbosch; Thorfinn Sand Korneliussen; Hancheng Zheng; Tao Liu; Weiming He; Kui Li; Ruibang Luo; Xifang Nie; Honglong Wu; Meiru Zhao; Hongzhi Cao; Jing Zou; Ying Shan; Shuzheng Li; Qi Yang; Peixiang Ni; Geng Tian; Junming Xu; Xiao Liu; Tao Jiang; Renhua Wu; Guangyu Zhou; Meifang Tang; Junjie Qin; Tong Wang; Shuijian Feng; Guohong Li; Jiangbai Luosang; Wei Wang; Fang Chen; Yading Wang; Xiaoguang Zheng; Zhuo Li; Zhuoma Bianba; Ge Yang; Xinping Wang; Shuhui Tang; Guoyi Gao; Yong Chen; Zhen Luo; Lamu Gusang; Zheng Cao; Qinghui Zhang; Weihan Ouyang; Xiaoli Ren; Huiqing Liang; Huisong Zheng; Yebo Huang; Jingxiang Li; Lars Bolund; Karsten Kristiansen; Yingrui Li; Yong Zhang; Xiuqing Zhang; Ruiqiang Li; Songgang Li; Huanming Yang; Rasmus Nielsen; Jun Wang; Jian Wang
Journal:  Science       Date:  2010-07-02       Impact factor: 47.728

5.  Population structure and eigenanalysis.

Authors:  Nick Patterson; Alkes L Price; David Reich
Journal:  PLoS Genet       Date:  2006-12       Impact factor: 5.917

6.  The complete genome sequence of a Neanderthal from the Altai Mountains.

Authors:  Kay Prüfer; Fernando Racimo; Nick Patterson; Flora Jay; Sriram Sankararaman; Susanna Sawyer; Anja Heinze; Gabriel Renaud; Peter H Sudmant; Cesare de Filippo; Heng Li; Swapan Mallick; Michael Dannemann; Qiaomei Fu; Martin Kircher; Martin Kuhlwilm; Michael Lachmann; Matthias Meyer; Matthias Ongyerth; Michael Siebauer; Christoph Theunert; Arti Tandon; Priya Moorjani; Joseph Pickrell; James C Mullikin; Samuel H Vohr; Richard E Green; Ines Hellmann; Philip L F Johnson; Hélène Blanche; Howard Cann; Jacob O Kitzman; Jay Shendure; Evan E Eichler; Ed S Lein; Trygve E Bakken; Liubov V Golovanova; Vladimir B Doronichev; Michael V Shunkov; Anatoli P Derevianko; Bence Viola; Montgomery Slatkin; David Reich; Janet Kelso; Svante Pääbo
Journal:  Nature       Date:  2013-12-18       Impact factor: 49.962

7.  Differentiated demographic histories and local adaptations between Sherpas and Tibetans.

Authors:  Chao Zhang; Yan Lu; Qidi Feng; Xiaoji Wang; Haiyi Lou; Jiaojiao Liu; Zhilin Ning; Kai Yuan; Yuchen Wang; Ying Zhou; Lian Deng; Lijun Liu; Yajun Yang; Shilin Li; Lifeng Ma; Zhiying Zhang; Li Jin; Bing Su; Longli Kang; Shuhua Xu
Journal:  Genome Biol       Date:  2017-06-15       Impact factor: 13.583

8.  Austro-Asiatic tribes of Northeast India provide hitherto missing genetic link between South and Southeast Asia.

Authors:  B Mohan Reddy; B T Langstieh; Vikrant Kumar; T Nagaraja; A N S Reddy; Aruna Meka; A G Reddy; K Thangaraj; Lalji Singh
Journal:  PLoS One       Date:  2007-11-07       Impact factor: 3.240

9.  Genetic evidence of a recent Tibetan ancestry to Sherpas in the Himalayan region.

Authors:  Sushil Bhandari; Xiaoming Zhang; Chaoying Cui; Shiyu Liao; Yi Peng; Hui Zhang; Kun Xiang; Hong Shi; Shimin Liu; Tianyi Wu; Xuebin Qi; Bing Su
Journal:  Sci Rep       Date:  2015-11-05       Impact factor: 4.379

10.  Reconstructing genetic history of Siberian and Northeastern European populations.

Authors:  Emily H M Wong; Andrey Khrunin; Larissa Nichols; Dmitry Pushkarev; Denis Khokhrin; Dmitry Verbenko; Oleg Evgrafov; James Knowles; John Novembre; Svetlana Limborska; Anton Valouev
Journal:  Genome Res       Date:  2016-12-13       Impact factor: 9.043

View more
  8 in total

1.  The matrilineal ancestry of Nepali populations.

Authors:  Rajdip Basnet; Niraj Rai; Rakesh Tamang; Nagendra Prasad Awasthi; Isha Pradhan; Pawan Parajuli; Deepak Kashyap; Alla Govardhan Reddy; Gyaneshwer Chaubey; Krishna Das Manandhar; Tilak Ram Shrestha; Kumarasamy Thangaraj
Journal:  Hum Genet       Date:  2022-10-15       Impact factor: 5.881

2.  Genetic polymorphisms and phylogenetic analyses of the Ü-Tsang Tibetan from Lhasa based on 30 slowly and moderately mutated Y-STR loci.

Authors:  Jiuyang Ding; Haoliang Fan; Yongsong Zhou; Zhuo Wang; Xiao Wang; Xuheng Song; Bofeng Zhu; Pingming Qiu
Journal:  Forensic Sci Res       Date:  2020-10-12

3.  Pinpointing the Geographic Origin of 165-Year-Old Human Skeletal Remains Found in Punjab, India: Evidence From Mitochondrial DNA and Stable Isotope Analysis.

Authors:  J S Sehrawat; Shailesh Agrawal; Deeksha Sankhyan; Monika Singh; Sachin Kumar; Satya Prakash; Richa Rajpal; Gyaneshwer Chaubey; Kumarasamy Thangaraj; Niraj Rai
Journal:  Front Genet       Date:  2022-04-28       Impact factor: 4.772

4.  COVID-19: Impact on linguistic and genetic isolates of India.

Authors:  Prajjval Pratap Singh; Prashanth Suravajhala; Chandana Basu Mallick; Rakesh Tamang; Ashutosh Kumar Rai; Pratheusa Machha; Royana Singh; Abhishek Pathak; Vijay Nath Mishra; Pankaj Shrivastava; Keshav K Singh; Kumarasamy Thangaraj; Gyaneshwer Chaubey
Journal:  Genes Immun       Date:  2021-10-11       Impact factor: 2.676

5.  The major genetic risk factor for severe COVID-19 does not show any association among South Asian populations.

Authors:  Prajjval Pratap Singh; Anshika Srivastava; Gazi Nurun Nahar Sultana; Nargis Khanam; Abhishek Pathak; Prashanth Suravajhala; Royana Singh; Pankaj Shrivastava; George van Driem; Kumarasamy Thangaraj; Gyaneshwer Chaubey
Journal:  Sci Rep       Date:  2021-06-11       Impact factor: 4.379

6.  Coronavirus (SARS-CoV-2) and Mortality Rate in India: The Winning Edge.

Authors:  Gyaneshwer Chaubey
Journal:  Front Public Health       Date:  2020-07-21

7.  Genetic and linguistic non-correspondence suggests evidence for collective social climbing in the Kol tribe of South Asia.

Authors:  Anshika Srivastava; Prajjval Pratap Singh; Audditiya Bandopadhyay; Pooja Singh; Debashruti Das; Rakesh Tamang; Akhilesh Kumar Chaubey; Pankaj Shrivastava; George van Driem; Gyaneshwer Chaubey
Journal:  Sci Rep       Date:  2020-03-27       Impact factor: 4.379

8.  Heterogeneity in Hematological Parameters of High and Low Altitude Tibetan Populations.

Authors:  Nipa Basak; Tsering Norboo; Mohammed S Mustak; Kumarasamy Thangaraj
Journal:  J Blood Med       Date:  2021-05-17
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.