Literature DB >> 29350289

Small RNA pathways responsible for non-cell-autonomous regulation of plant reproduction.

Ken-Ichi Nonomura1,2.   

Abstract

In angiosperms, germline precursors and germ cells are always attached to or engulfed within somatic companion cells until just before fertilization. This is because sperm and egg cells develop as part of the multicellular gametophyte. Thus, the non-cell-autonomous regulation by somatic companions plays important roles in efficient reproduction, in addition to the cell-autonomous regulation. Epigenetic silencing of transposable elements is one of the central events by which the germline transmits the error-free genome to the next generation. This review focuses on small RNA-mediated epigenetic regulation of meiosis, spore formation and pollen development. Besides microRNA (miRNA) and small interfering RNA (siRNA), animals express PIWI-interacting RNA (piRNA), a germline-specific class of small RNAs. Plants lack piRNA-like RNAs and, instead, express unique classes of small RNAs: trans-acting siRNA (tasiRNA) and phased secondary siRNA (phasiRNA). Especially in grass species, 21- and 24-nucleotide phasiRNAs are abundant in anthers during premeiosis and meiosis. This review also describes recent progress in reproductive phasiRNA research.

Entities:  

Keywords:  Argonaute protein; Cell-to-cell communication; Epigenetics; Meiosis; Reproduction; Small RNA

Mesh:

Substances:

Year:  2018        PMID: 29350289     DOI: 10.1007/s00497-018-0321-x

Source DB:  PubMed          Journal:  Plant Reprod        ISSN: 2194-7953            Impact factor:   3.767


  64 in total

1.  Function of the DEMETER DNA glycosylase in the Arabidopsis thaliana male gametophyte.

Authors:  Vera K Schoft; Nina Chumak; Yeonhee Choi; Mike Hannon; Marcelina Garcia-Aguilar; Adriana Machlicova; Lucyna Slusarz; Magdalena Mosiolek; Jin-Sup Park; Guen Tae Park; Robert L Fischer; Hisashi Tamaru
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-25       Impact factor: 11.205

Review 2.  Role of microRNAs in plant and animal development.

Authors:  James C Carrington; Victor Ambros
Journal:  Science       Date:  2003-07-18       Impact factor: 47.728

3.  Ovule is a lateral organ finally differentiated from the terminating floral meristem in rice.

Authors:  Shinichiro Yamaki; Yasuo Nagato; Nori Kurata; Ken-ichi Nonomura
Journal:  Dev Biol       Date:  2010-12-10       Impact factor: 3.582

4.  A germ cell specific gene of the ARGONAUTE family is essential for the progression of premeiotic mitosis and meiosis during sporogenesis in rice.

Authors:  Ken-Ichi Nonomura; Akane Morohoshi; Mutsuko Nakano; Mitsugu Eiguchi; Akio Miyao; Hirohiko Hirochika; Nori Kurata
Journal:  Plant Cell       Date:  2007-08-03       Impact factor: 11.277

5.  Induction of RNA-directed DNA methylation upon decondensation of constitutive heterochromatin.

Authors:  Vera K Schoft; Nina Chumak; Magdalena Mosiolek; Lucyna Slusarz; Vukoslav Komnenovic; Lynette Brownfield; David Twell; Tetsuji Kakutani; Hisashi Tamaru
Journal:  EMBO Rep       Date:  2009-08-14       Impact factor: 8.807

6.  Rice RNA-dependent RNA polymerase 6 acts in small RNA biogenesis and spikelet development.

Authors:  Xianwei Song; Dekai Wang; Lijia Ma; Zhiyu Chen; Pingchuan Li; Xia Cui; Chunyan Liu; Shouyun Cao; Chengcai Chu; Yuezhi Tao; Xiaofeng Cao
Journal:  Plant J       Date:  2012-06-05       Impact factor: 6.417

Review 7.  RNA-directed DNA methylation: an epigenetic pathway of increasing complexity.

Authors:  Marjori A Matzke; Rebecca A Mosher
Journal:  Nat Rev Genet       Date:  2014-05-08       Impact factor: 53.242

8.  Silencing in sperm cells is directed by RNA movement from the surrounding nurse cell.

Authors:  Germán Martínez; Kaushik Panda; Claudia Köhler; R Keith Slotkin
Journal:  Nat Plants       Date:  2016-03-21       Impact factor: 15.793

9.  RNA-directed DNA methylation regulates parental genomic imprinting at several loci in Arabidopsis.

Authors:  Thiet Minh Vu; Miyuki Nakamura; Joseph P Calarco; Daichi Susaki; Pei Qi Lim; Tetsu Kinoshita; Tetsuya Higashiyama; Robert A Martienssen; Frédéric Berger
Journal:  Development       Date:  2013-06-12       Impact factor: 6.868

10.  The WUSCHEL gene is required for shoot and floral meristem integrity in Arabidopsis.

Authors:  T Laux; K F Mayer; J Berger; G Jürgens
Journal:  Development       Date:  1996-01       Impact factor: 6.868

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  7 in total

1.  Identification and functional analyses of new sesame miRNAs (Sesamum indicum L.) and their targets.

Authors:  Sevgi Marakli
Journal:  Mol Biol Rep       Date:  2018-09-12       Impact factor: 2.316

2.  Gene Function Rather than Reproductive Mode Drives the Evolution of RNA Helicases in Sexual and Apomictic Boechera.

Authors:  Markus Kiefer; Berit H Nauerth; Christopher Volkert; David Ibberson; Anna Loreth; Anja Schmidt
Journal:  Genome Biol Evol       Date:  2020-05-01       Impact factor: 3.416

3.  Small RNA-seq reveals novel regulatory components for apomixis in Paspalum notatum.

Authors:  Juan Pablo A Ortiz; Olivier Leblanc; Cristian Rohr; Mauricio Grisolia; Lorena A Siena; Maricel Podio; Carolina Colono; Celeste Azzaro; Silvina C Pessino
Journal:  BMC Genomics       Date:  2019-06-13       Impact factor: 3.969

4.  High-throughput single-cell transcriptomics reveals the female germline differentiation trajectory in Arabidopsis thaliana.

Authors:  Zhimin Hou; Yanhui Liu; Man Zhang; Lihua Zhao; Xingyue Jin; Liping Liu; Zhenxia Su; Hanyang Cai; Yuan Qin
Journal:  Commun Biol       Date:  2021-10-01

Review 5.  Big Role of Small RNAs in Female Gametophyte Development.

Authors:  Mohammad Aslam; Beenish Fakher; Yuan Qin
Journal:  Int J Mol Sci       Date:  2022-02-10       Impact factor: 5.923

6.  Dicer-like 5 deficiency confers temperature-sensitive male sterility in maize.

Authors:  Chong Teng; Han Zhang; Reza Hammond; Kun Huang; Blake C Meyers; Virginia Walbot
Journal:  Nat Commun       Date:  2020-06-09       Impact factor: 14.919

7.  Reproductive phasiRNAs regulate reprogramming of gene expression and meiotic progression in rice.

Authors:  Yu-Chan Zhang; Meng-Qi Lei; Yan-Fei Zhou; Yu-Wei Yang; Jian-Ping Lian; Yang Yu; Yan-Zhao Feng; Ke-Reng Zhou; Rui-Rui He; Huang He; Zhi Zhang; Jian-Hua Yang; Yue-Qin Chen
Journal:  Nat Commun       Date:  2020-11-27       Impact factor: 14.919

  7 in total

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