| Literature DB >> 29343214 |
Saad Mahmud Khan1, Sarah El Hajj Chehadeh2, Mehera Abdulrahman3, Wael Osman2, Habiba Al Safar4,5.
Abstract
BACKGROUND: Obesity is a metabolic disease that is widely prevalent with approximately 600 million people classified as obese worldwide. Its etiology is multifactorial and involves a complex interplay between genes and the environment. Over the past few decades, obesity rates among the Emirati population have been increasing. The aim of this study was to investigate the association of candidate gene single nucleotide polymorphisms (SNPs), namely FTO (rs9939609) and VDR (rs1544410), with obesity in the UAE population.Entities:
Keywords: BMI; FTO gene; Obesity; Physical activity; United Arab Emirates
Mesh:
Substances:
Year: 2018 PMID: 29343214 PMCID: PMC5773046 DOI: 10.1186/s12881-018-0522-z
Source DB: PubMed Journal: BMC Med Genet ISSN: 1471-2350 Impact factor: 2.103
Clinical and biochemical characteristics of the study subjects
| Category | Variable | Obese ( | Overweight ( | Normal ( | |
|---|---|---|---|---|---|
| Demographic data | Age (years) | 57.48 ± 11.80 | 57.66 ± 12.05 | 52.10 ± 15.56 |
|
| BMI (kg/m2) | 35.77 ± 4.55 | 27.56 ± 1.44 | 22.72 ± 1.84 |
| |
| Systolic blood pressure (mmHg) | 131.05 ± 16.18 | 126.63 ± 16.70 | 122.68 ± 19.28 |
| |
| Diastolic blood pressure (mmHg) | 74.30 ± 10.71 | 72.74 ± 11.87 | 71.58 ± 11.94 | 0.155 | |
| Biochemical tests | HbA1c (%) | 7.24 ± 1.48 | 7.19 ± 1.48 | 6.57 ± 1.17 |
|
| Triglyceride (mmol/L) | 1.80 ± 2.25 | 1.59 ± 1.56 | 1.15 ± 0.58 | 0.091 | |
| Total Cholesterol (mmol/L) | 4.20 ± 1.45 | 4.19 ± 1.68 | 4.37 ± 1.11 | 0.738 | |
| HDL Cholesterol (mmol/L) | 1.30 ± 0.68 | 1.17 ± 0.40 | 1.30 ± 0.38 | 0.162 | |
| LDL Cholesterol (mmol/L) | 2.23 ± 1.03 | 2.36 ± 1.29 | 2.54 ± 1.02 | 0.199 | |
| Lifestyle data | Smoker (Yes) | 8.08% | 7.96% | 10.41% | 0.769 |
| Physically active (Yes) | 53.77% | 57.39% | 43.75% | 0.124 |
All continuous variables are presented as mean ± standard deviation. All binary variables are presented as percentages Abbreviations- BMI Body mass index, HbA1c Glycosylated hemoglobin, HDL High density lipoprotein, LDL Low density lipoprotein, n Number of individuals. *Significant p-values< 0.05 are in bold
Association between BMI and clinical and laboratory variables of the study subjects
| Clinical or biochemical variant | Estimate | SE |
|
|---|---|---|---|
| Age | −0.017 | 0.005 |
|
| Systolic blood pressure | 0.011 | 0.004 |
|
| Diastolic blood pressure | −0.001 | 0.006 | 0.800 |
| HbA1c | 0.056 | 0.038 | 0.150 |
| Triglyceride | −0.027 | 0.060 | 0.650 |
| Total Cholesterol | 0.174 | 0.169 | 0.300 |
| HDL Cholesterol | 0.032 | 0.115 | 0.780 |
| LDL Cholesterol | −0.245 | 0.181 | 0.180 |
| Vitamin D | 0.0004 | 0.002 | 0.850 |
Abbreviations- HbA1c Glycosylated hemoglobin, HDL High density lipoprotein, LDL Low density lipoprotein, P p value, SE Standard error. *Significant p values< 0.05 are in bold
Association between BMI and SNPs selected for the study
| SNPs | Gene | Alleles (1 / 2) | MAF | Estimate | SE |
|
|---|---|---|---|---|---|---|
| rs9939609 |
| A / T | 0.416 | −0.166 | 0.066 |
|
| rs1544410 |
| C / T | 0.486 | −0.082 | 0.066 | 0.210 |
Abbreviations- BMI Body mass index, FTO Fat mass and obesity-associated protein, VDR Vitamin D receptor, SNP Single nucleotide polymorphism, Allele 1 / 2: minor / major alleles. Genotypes with significant p < 0.05 are marked in bold. *P values are adjusted for age of subjects and their systolic blood pressure values
Fig. 1Association between BMI and genotypes of FTO SNP (rs9939609)
Association of rs9939609 (FTO) and rs1544410 (VDR) with BMI in males and females
| Log-additive model | ||||||
|---|---|---|---|---|---|---|
| Gender | Genotype | Mean BMI (kg/m2) | Genotype | Mean BMI (kg/m2) | ||
| Male |
| 31.67 | 0.112 |
| 32.30 | 0.165 |
|
| 29.77 |
| 28.63 | |||
|
| 29.44 |
| 30.41 | |||
| Female |
| 31.97 |
|
| 30.67 | 0.796 |
|
| 30.99 |
| 30.91 | |||
|
| 29.67 |
| 30.38 | |||
*significant p-values shown in bold (p < 0.05). Abbreviations- BMI Body mass index, FTO Fat mass and obesity-associated protein, VDR Vitamin D receptor, SNP single nucleotide polymorphism
Fig. 2Gene-Gene interaction of FTO rs9939609 with VDR rs1544410 on BMI values
Fig. 3Body mass index values for genotype combinations of SNPs rs9939609 and rs1544410
Interaction of the SNP rs9939609 (FTO) with physical activity (Yes/No) effect on BMI
| Gene (SNP) | Physical Activity | Genotypes | Frequency | Mean BMI (kg/m2) |
|
|---|---|---|---|---|---|
| Yes |
| 33 | 31 | 0.027* | |
|
| 78 |
| |||
|
| 74 |
| |||
| No |
| 44 | 34 | ||
|
| 96 |
| |||
|
| 69 |
|
*significant p-values adjusted for age and systolic blood pressure (p < 0.05). Abbreviations- BMI Body Mass Index, FTO Fat mass and obesity-associated protein, SNP Single nucleotide polymorphism