Literature DB >> 29326214

Whole-Genome Sequences of Brucella melitensis Strain QH61, Isolated from Yak in Qinghai, China.

Xiaoan Cao1, Zhaocai Li1, Zhongzi Lou1, Baoquan Fu1, Yongsheng Liu1, Youjun Shang1, Jizhang Zhou2, Zhizhong Jing2.   

Abstract

The facultative intracellular Gram-negative bacterium Brucella melitensis causes brucellosis in domestic and wild mammals. Brucella melitensis QH61 was isolated from a yak suffering from abortion in 2015 in Qinghai, China. Here, we report the whole-genome sequence of B. melitensis strain QH61.
Copyright © 2018 Cao et al.

Entities:  

Year:  2018        PMID: 29326214      PMCID: PMC5764938          DOI: 10.1128/genomeA.01422-17

Source DB:  PubMed          Journal:  Genome Announc


GENOME ANNOUNCEMENT

Brucella spp. are Gram-negative and facultative intracelluar pathogens that cause animal brucellosis, a disease that leads to abortion and infertility in livestock and severe economic losses and threats to health in humans (1, 2). In recent years, brucellosis has reemerged in animals in China. Brucella melitensis not only causes the most cases of brucellosis in animals but also is an important pathogen responsible for human disease (3, 4). Here, we present the genome sequence of B. melitensis QH61, which was isolated in China from the spleen of an aborted yak fetus. This is the first report of the whole-genome sequencing of a B. melitensis strain isolated from yak in China. Genomic DNA was extracted with the DNeasy blood and tissue kit (Qiagen, Valencia, CA). This genome was sequenced by using PacBio technology after library construction with PacBio RS II and Illumina HiSeq DNA to determine the complete genomic sequence of the B. melitensis QH61. The annotation was performed using GeneMarkS (5), Repeat Masker (6), TRF (7), tRNAscan-SE (8), and RNAmmer (9). The whole-genome sequence of B. melitensis QH61 was found to be 3,311,767 bp in size and to be composed of two circular chromosomes, chromosome I (2,126,173 bp) and chromosome II (1,185,594 bp). The G+C content of this strain is 58.34%. Approximately 86.67% (2,870,451 bp) of the nucleotide sequences were predicted to be coding sequences containing 3,317 genes, and the average gene length was 865 bp. This strain has 2 small RNAs (sRNAs), 55 tRNAs, and 3 rRNAs (1 23S, 1 16S, and 1 5S). A total of 2,258 (68.1%) of 3,317 protein-coding genes had at least some biological function assigned, with some of the genes assigned to more than one category (10).

Accession number(s).

The whole-genome sequence of B. melitensis QH61 has been deposited at DDBJ/EMBL/GenBank under the accession no. CP024653 and CP024654.
  10 in total

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Authors:  Zhi-Guo Liu; Dong-Dong Di; Miao Wang; Ri-Hong Liu; Hong-Yan Zhao; Dong-Ri Piao; Guo-Zhong Tian; Wei-Xing Fan; Hai Jiang; Bu-Yun Cui; Xian-Zhu Xia
Journal:  Front Microbiol       Date:  2017-01-18       Impact factor: 5.640

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  10 in total

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