Literature DB >> 29316791

Serine Integrases: Advancing Synthetic Biology.

Christine A Merrick1, Jia Zhao2, Susan J Rosser1.   

Abstract

Serine integrases catalyze precise rearrangement of DNA through site-specific recombination of small sequences of DNA called attachment (att) sites. Unlike other site-specific recombinases, the recombination reaction driven by serine integrases is highly directional and can only be reversed in the presence of an accessory protein called a recombination directionality factor (RDF). The ability to control reaction directionality has led to the development of serine integrases as tools for controlled rearrangement and modification of DNA in synthetic biology, gene therapy, and biotechnology. This review discusses recent advances in serine integrase technologies focusing on their applications in genome engineering, DNA assembly, and logic and data storage devices.

Keywords:  DNA assembly; genetic data storage; genome engineering; logic devices; recombination directionality factor (RDF); serine integrase

Mesh:

Substances:

Year:  2018        PMID: 29316791     DOI: 10.1021/acssynbio.7b00308

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  28 in total

1.  Construction of a new integrating vector from actinophage ϕOZJ and its use in multiplex Streptomyces transformation.

Authors:  Bryan Ko; John D'Alessandro; Lee Douangkeomany; Spencer Stumpf; Ashby deButts; Joshua Blodgett
Journal:  J Ind Microbiol Biotechnol       Date:  2019-11-08       Impact factor: 3.346

Review 2.  Delineation of mechanistic approaches of rhizosphere microorganisms facilitated plant health and resilience under challenging conditions.

Authors:  Ajinath Dukare; Priyank Mhatre; Hemant S Maheshwari; Samadhan Bagul; B S Manjunatha; Yogesh Khade; Umesh Kamble
Journal:  3 Biotech       Date:  2022-02-04       Impact factor: 2.406

3.  Decoupling Growth and Production by Removing the Origin of Replication from a Bacterial Chromosome.

Authors:  Marje Kasari; Villu Kasari; Mirjam Kärmas; Arvi Jõers
Journal:  ACS Synth Biol       Date:  2022-07-07       Impact factor: 5.249

4.  Computational Methods for the Design of Recombinase Logic Circuits with Adaptable Circuit Specifications.

Authors:  Ana Zúñiga; Jérôme Bonnet; Sarah Guiziou
Journal:  Methods Mol Biol       Date:  2023

5.  Systematic discovery of recombinases for efficient integration of large DNA sequences into the human genome.

Authors:  Matthew G Durrant; Alison Fanton; Josh Tycko; Michaela Hinks; Sita S Chandrasekaran; Nicholas T Perry; Julia Schaepe; Peter P Du; Peter Lotfy; Michael C Bassik; Lacramioara Bintu; Ami S Bhatt; Patrick D Hsu
Journal:  Nat Biotechnol       Date:  2022-10-10       Impact factor: 68.164

Review 6.  Speciation and adaptation research meets genome editing.

Authors:  Satoshi Ansai; Jun Kitano
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2022-05-30       Impact factor: 6.671

7.  Serine Integrase attP Binding and Specificity.

Authors:  Huiguang Li; Robert Sharp; Karen Rutherford; Kushol Gupta; Gregory D Van Duyne
Journal:  J Mol Biol       Date:  2018-09-15       Impact factor: 5.469

Review 8.  CRISPR-based genome editing through the lens of DNA repair.

Authors:  Tarun S Nambiar; Lou Baudrier; Pierre Billon; Alberto Ciccia
Journal:  Mol Cell       Date:  2022-01-20       Impact factor: 17.970

9.  Control of the Serine Integrase Reaction: Roles of the Coiled-Coil and Helix E Regions in DNA Site Synapsis and Recombination.

Authors:  Sridhar Mandali; Reid C Johnson
Journal:  J Bacteriol       Date:  2021-07-22       Impact factor: 3.490

Review 10.  Phage satellites and their emerging applications in biotechnology.

Authors:  Rodrigo Ibarra-Chávez; Mads Frederik Hansen; Rafael Pinilla-Redondo; Kimberley D Seed; Urvish Trivedi
Journal:  FEMS Microbiol Rev       Date:  2021-11-23       Impact factor: 15.177

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