Literature DB >> 29314482

Insights into the Desaturation of Cyclopeptin and its C3 Epimer Catalyzed by a non-Heme Iron Enzyme: Structural Characterization and Mechanism Elucidation.

Hsuan-Jen Liao1, Jikun Li2, Jhih-Liang Huang3, Madison Davidson3, Igor Kurnikov2, Te-Sheng Lin1, Justin L Lee2, Maria Kurnikova2, Yisong Guo2, Nei-Li Chan1, Wei-Chen Chang3.   

Abstract

AsqJ, an iron(II)- and 2-oxoglutarate-dependent enzyme found in viridicatin-type alkaloid biosynthetic pathways, catalyzes sequential desaturation and epoxidation to produce cyclopenins. Crystal structures of AsqJ bound to cyclopeptin and its C3 epimer are reported. Meanwhile, a detailed mechanistic study was carried out to decipher the desaturation mechanism. These findings suggest that a pathway involving hydrogen atom abstraction at the C10 position of the substrate by a short-lived FeIV -oxo species and the subsequent formation of a carbocation or a hydroxylated intermediate is preferred during AsqJ-catalyzed desaturation.
© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  C−C bond formation; carbocations; desaturation; enzyme mechanisms; viridicatin

Mesh:

Substances:

Year:  2018        PMID: 29314482     DOI: 10.1002/anie.201710567

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   16.823


  11 in total

1.  α-Amine Desaturation of d-Arginine by the Iron(II)- and 2-(Oxo)glutarate-Dependent l-Arginine 3-Hydroxylase, VioC.

Authors:  Noah P Dunham; Andrew J Mitchell; José M Del Río Pantoja; Carsten Krebs; J Martin Bollinger; Amie K Boal
Journal:  Biochemistry       Date:  2018-11-07       Impact factor: 3.162

2.  Epoxidation Catalyzed by the Nonheme Iron(II)- and 2-Oxoglutarate-Dependent Oxygenase, AsqJ: Mechanistic Elucidation of Oxygen Atom Transfer by a Ferryl Intermediate.

Authors:  Jikun Li; Hsuan-Jen Liao; Yijie Tang; Jhih-Liang Huang; Lide Cha; Te-Sheng Lin; Justin L Lee; Igor V Kurnikov; Maria G Kurnikova; Wei-Chen Chang; Nei-Li Chan; Yisong Guo
Journal:  J Am Chem Soc       Date:  2020-03-16       Impact factor: 15.419

3.  Hydrogen Donation but not Abstraction by a Tyrosine (Y68) during Endoperoxide Installation by Verruculogen Synthase (FtmOx1).

Authors:  Noah P Dunham; José M Del Río Pantoja; Bo Zhang; Lauren J Rajakovich; Benjamin D Allen; Carsten Krebs; Amie K Boal; J Martin Bollinger
Journal:  J Am Chem Soc       Date:  2019-06-12       Impact factor: 15.419

Review 4.  Amazing Diversity in Biochemical Roles of Fe(II)/2-Oxoglutarate Oxygenases.

Authors:  Caitlyn Q Herr; Robert P Hausinger
Journal:  Trends Biochem Sci       Date:  2018-04-27       Impact factor: 13.807

5.  Probing the Mechanism of Isonitrile Formation by a Non-Heme Iron(II)-Dependent Oxidase/Decarboxylase.

Authors:  Antonio Del Rio Flores; David W Kastner; Yongle Du; Maanasa Narayanamoorthy; Yuanbo Shen; Wenlong Cai; Vyshnavi Vennelakanti; Nicholas A Zill; Luisa B Dell; Rui Zhai; Heather J Kulik; Wenjun Zhang
Journal:  J Am Chem Soc       Date:  2022-03-07       Impact factor: 15.419

6.  Harnessing the Substrate Promiscuity of Dioxygenase AsqJ and Developing Efficient Chemoenzymatic Synthesis for Quinolones.

Authors:  Haoyu Tang; Yijie Tang; Igor V Kurnikov; Hsuan-Jen Liao; Nei-Li Chan; Maria G Kurnikova; Yisong Guo; Wei-Chen Chang
Journal:  ACS Catal       Date:  2021-06-06       Impact factor: 13.700

Review 7.  Recent examples of α-ketoglutarate-dependent mononuclear non-haem iron enzymes in natural product biosyntheses.

Authors:  Shu-Shan Gao; Nathchar Naowarojna; Ronghai Cheng; Xueting Liu; Pinghua Liu
Journal:  Nat Prod Rep       Date:  2018-08-15       Impact factor: 13.423

8.  On how the binding cavity of AsqJ dioxygenase controls the desaturation reaction regioselectivity: a QM/MM study.

Authors:  Zuzanna Wojdyla; Tomasz Borowski
Journal:  J Biol Inorg Chem       Date:  2018-06-06       Impact factor: 3.358

9.  Molecular insights into the unusually promiscuous and catalytically versatile Fe(II)/α-ketoglutarate-dependent oxygenase SptF.

Authors:  Hui Tao; Takahiro Mori; Heping Chen; Shuang Lyu; Akihito Nonoyama; Shoukou Lee; Ikuro Abe
Journal:  Nat Commun       Date:  2022-01-10       Impact factor: 14.919

10.  Dissecting the Mechanism of the Nonheme Iron Endoperoxidase FtmOx1 Using Substrate Analogues.

Authors:  Guoliang Zhu; Wupeng Yan; Xinye Wang; Ronghai Cheng; Nathchar Naowarojna; Kun Wang; Jun Wang; Heng Song; Yuyang Wang; Hairong Liu; Xuekui Xia; Catherine E Costello; Xueting Liu; Lixin Zhang; Pinghua Liu
Journal:  JACS Au       Date:  2022-06-10
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