Literature DB >> 29300872

A generic individual-based model to simulate morphogenesis, C-N acquisition and population dynamics in contrasting forage legumes.

Gaëtan Louarn1, Lucas Faverjon1.   

Abstract

Background and Aims: Individual-based models (IBMs) are promising tools to disentangle plant interactions in multi-species grasslands and foster innovative species mixtures. This study describes an IBM dealing with the morphogenesis, growth and C-N acquisition of forage legumes that integrates plastic responses from functional-structural plant models.
Methods: A generic model was developed to account for herbaceous legume species with contrasting above- and below-ground morphogenetic syndromes and to integrate the responses of plants to light, water and N. Through coupling with a radiative transfer model and a three-dimensional virtual soil, the model allows dynamic resolution of competition for multiple resources at individual plant level within a plant community. The behaviour of the model was assessed on a range of monospecific stands grown along gradients of light, water and N availability. Key
Results: The model proved able to capture the diversity of morphologies encountered among the forage legumes. The main density-dependent features known about even-age plant populations were correctly anticipated. The model predicted (1) the 'reciprocal yield' law relating average plant mass to density, (2) a self-thinning pattern close to that measured for herbaceous species and (3) consistent changes in the size structure of plant populations with time and pedo-climatic conditions. In addition, plastic changes in the partitioning of dry matter, the N acquisition mode and in the architecture of shoots and roots emerged from the integration of plant responses to their local environment. This resulted in taller plants and thinner roots when competition was dominated by light, and shorter plants with relatively more developed root systems when competition was dominated by soil resources. Conclusions: A population dynamic model considering growth and morphogenesis responses to multiple resources heterogeneously distributed in the environment was presented. It should allow scaling plant-plant interactions from individual to community levels without the inconvenience of average plant models.

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Year:  2018        PMID: 29300872      PMCID: PMC5906914          DOI: 10.1093/aob/mcx154

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  29 in total

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Journal:  Ann Bot       Date:  2010-07-19       Impact factor: 4.357

Review 2.  To what extent may changes in the root system architecture of Arabidopsis thaliana grown under contrasted homogenous nitrogen regimes be explained by changes in carbon supply? A modelling approach.

Authors:  François Brun; Céline Richard-Molard; Loïc Pagès; Michaël Chelle; Bertrand Ney
Journal:  J Exp Bot       Date:  2010-04-16       Impact factor: 6.992

3.  Computing competition for light in the GREENLAB model of plant growth: a contribution to the study of the effects of density on resource acquisition and architectural development.

Authors:  Paul-Henry Cournède; Amélie Mathieu; François Houllier; Daniel Barthélémy; Philippe de Reffye
Journal:  Ann Bot       Date:  2007-11-23       Impact factor: 4.357

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Journal:  Monogr Popul Biol       Date:  1988

Review 5.  Paradigm shift in plant growth control.

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Journal:  Curr Opin Plant Biol       Date:  2015-05-28       Impact factor: 7.834

Review 6.  Differentiation and frequency distributions of body weights in plants and animals.

Authors:  J Uchmański
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1985-08-17       Impact factor: 6.237

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8.  A developmentally based categorization of branching in Trifolium repens L.: influence of nodal roots.

Authors:  R G Thomas; M J M Hay; P C D Newton
Journal:  Ann Bot       Date:  2002-09       Impact factor: 4.357

9.  An empirical model that uses light attenuation and plant nitrogen status to predict within-canopy nitrogen distribution and upscale photosynthesis from leaf to whole canopy.

Authors:  Gaëtan Louarn; Ela Frak; Serge Zaka; Jorge Prieto; Eric Lebon
Journal:  AoB Plants       Date:  2015-10-03       Impact factor: 3.276

10.  A Conserved Potential Development Framework Applies to Shoots of Legume Species with Contrasting Morphogenetic Strategies.

Authors:  Lucas Faverjon; Abraham J Escobar-Gutiérrez; Isabelle Litrico; Gaëtan Louarn
Journal:  Front Plant Sci       Date:  2017-03-27       Impact factor: 5.753

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  7 in total

1.  Investigation of complex canopies with a functional-structural plant model as exemplified by leaf inclination effect on the functioning of pure and mixed stands of wheat during grain filling.

Authors:  Romain Barillot; Camille Chambon; Christian Fournier; Didier Combes; Christophe Pradal; Bruno Andrieu
Journal:  Ann Bot       Date:  2019-03-14       Impact factor: 4.357

Review 2.  Two decades of functional-structural plant modelling: now addressing fundamental questions in systems biology and predictive ecology.

Authors:  Gaëtan Louarn; Youhong Song
Journal:  Ann Bot       Date:  2020-09-14       Impact factor: 4.357

3.  WALTer: a three-dimensional wheat model to study competition for light through the prediction of tillering dynamics.

Authors:  Christophe Lecarpentier; Romain Barillot; Emmanuelle Blanc; Mariem Abichou; Isabelle Goldringer; Pierre Barbillon; Jérôme Enjalbert; Bruno Andrieu
Journal:  Ann Bot       Date:  2019-06-24       Impact factor: 4.357

4.  Parameter estimation for functional-structural plant models when data are scarce: using multiple patterns for rejecting unsuitable parameter sets.

Authors:  Ming Wang; Neil White; Jim Hanan; Di He; Enli Wang; Bronwen Cribb; Darren J Kriticos; Dean Paini; Volker Grimm
Journal:  Ann Bot       Date:  2020-09-14       Impact factor: 4.357

Review 5.  An overview of agent-based models in plant biology and ecology.

Authors:  Bo Zhang; Donald L DeAngelis
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6.  Internal trophic pressure, a regulator of plant development? Insights from a stochastic functional-structural plant growth model applied to Coffea trees.

Authors:  Véronique Letort; Sylvie Sabatier; Michelle Pamelas Okoma; Marc Jaeger; Philippe de Reffye
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7.  Towards intercrop ideotypes: non-random trait assembly can promote overyielding and stability of species proportion in simulated legume-based mixtures.

Authors:  Gaëtan Louarn; Romain Barillot; Didier Combes; Abraham Escobar-Gutiérrez
Journal:  Ann Bot       Date:  2020-09-14       Impact factor: 4.357

  7 in total

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