Literature DB >> 29297208

Method for accurate registration of tissue autofluorescence imaging data with corresponding histology: a means for enhanced tumor margin assessment.

Jakob Unger1, Tianchen Sun2, Yi-Ling Chen2, Jennifer E Phipps1, Richard J Bold3, Morgan A Darrow4, Kwan-Liu Ma2, Laura Marcu1.   

Abstract

An important step in establishing the diagnostic potential for emerging optical imaging techniques is accurate registration between imaging data and the corresponding tissue histopathology typically used as gold standard in clinical diagnostics. We present a method to precisely register data acquired with a point-scanning spectroscopic imaging technique from fresh surgical tissue specimen blocks with corresponding histological sections. Using a visible aiming beam to augment point-scanning multispectral time-resolved fluorescence spectroscopy on video images, we evaluate two different markers for the registration with histology: fiducial markers using a 405-nm CW laser and the tissue block's outer shape characteristics. We compare the registration performance with benchmark methods using either the fiducial markers or the outer shape characteristics alone to a hybrid method using both feature types. The hybrid method was found to perform best reaching an average error of 0.78±0.67  mm. This method provides a profound framework to validate diagnostical abilities of optical fiber-based techniques and furthermore enables the application of supervised machine learning techniques to automate tissue characterization. (2018) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE).

Entities:  

Keywords:  fiducials; fluorescence; histology; point-scanning; registration; shape matching

Mesh:

Year:  2018        PMID: 29297208      PMCID: PMC5749583          DOI: 10.1117/1.JBO.23.1.015001

Source DB:  PubMed          Journal:  J Biomed Opt        ISSN: 1083-3668            Impact factor:   3.170


  23 in total

1.  Raman spectroscopy for early detection of laryngeal malignancy: preliminary results.

Authors:  N Stone; P Stavroulaki; C Kendall; M Birchall; H Barr
Journal:  Laryngoscope       Date:  2000-10       Impact factor: 3.325

2.  Shape classification using the inner-distance.

Authors:  Haibin Ling; David W Jacobs
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2007-02       Impact factor: 6.226

3.  elastix: a toolbox for intensity-based medical image registration.

Authors:  Stefan Klein; Marius Staring; Keelin Murphy; Max A Viergever; Josien P W Pluim
Journal:  IEEE Trans Med Imaging       Date:  2009-11-17       Impact factor: 10.048

4.  Elastic registration of multimodal prostate MRI and histology via multiattribute combined mutual information.

Authors:  Jonathan Chappelow; B Nicolas Bloch; Neil Rofsky; Elizabeth Genega; Robert Lenkinski; William DeWolf; Anant Madabhushi
Journal:  Med Phys       Date:  2011-04       Impact factor: 4.071

5.  Early diagnosis of upper aerodigestive tract cancer by autofluorescence.

Authors:  J K Dhingra; D F Perrault; K McMillan; E E Rebeiz; S Kabani; R Manoharan; I Itzkan; M S Feld; S M Shapshay
Journal:  Arch Otolaryngol Head Neck Surg       Date:  1996-11

6.  Registration of prostate histology images to ex vivo MR images via strand-shaped fiducials.

Authors:  Eli Gibson; Cathie Crukley; Mena Gaed; José A Gómez; Madeleine Moussa; Joseph L Chin; Glenn S Bauman; Aaron Fenster; Aaron D Ward
Journal:  J Magn Reson Imaging       Date:  2012-07-31       Impact factor: 4.813

7.  Design and evaluation of a device for fast multispectral time-resolved fluorescence spectroscopy and imaging.

Authors:  Diego R Yankelevich; Dinglong Ma; Jing Liu; Yang Sun; Yinghua Sun; Julien Bec; Daniel S Elson; Laura Marcu
Journal:  Rev Sci Instrum       Date:  2014-03       Impact factor: 1.523

8.  Accurate three-dimensional registration of CT, PET, and/or MR images of the brain.

Authors:  C A Pelizzari; G T Chen; D R Spelbring; R R Weichselbaum; C T Chen
Journal:  J Comput Assist Tomogr       Date:  1989 Jan-Feb       Impact factor: 1.826

9.  Three-dimensional registration of intravascular optical coherence tomography and cryo-image volumes for microscopic-resolution validation.

Authors:  David Prabhu; Emile Mehanna; Madhusudhana Gargesha; Eric Brandt; Di Wen; Nienke S van Ditzhuijzen; Daniel Chamie; Hirosada Yamamoto; Yusuke Fujino; Ali Alian; Jaymin Patel; Marco Costa; Hiram G Bezerra; David L Wilson
Journal:  J Med Imaging (Bellingham)       Date:  2016-06-28

10.  Auto-fluorescence lifetime and light reflectance spectroscopy for breast cancer diagnosis: potential tools for intraoperative margin detection.

Authors:  Vikrant Sharma; Shivaranjani Shivalingaiah; Yan Peng; David Euhus; Zygmunt Gryczynski; Hanli Liu
Journal:  Biomed Opt Express       Date:  2012-07-09       Impact factor: 3.732

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  5 in total

1.  Real-time diagnosis and visualization of tumor margins in excised breast specimens using fluorescence lifetime imaging and machine learning.

Authors:  Jakob Unger; Christoph Hebisch; Jennifer E Phipps; João L Lagarto; Hanna Kim; Morgan A Darrow; Richard J Bold; Laura Marcu
Journal:  Biomed Opt Express       Date:  2020-02-14       Impact factor: 3.732

2.  Intensity-based registration of bright-field and second-harmonic generation images of histopathology tissue sections.

Authors:  Adib Keikhosravi; Bin Li; Yuming Liu; Kevin W Eliceiri
Journal:  Biomed Opt Express       Date:  2019-12-09       Impact factor: 3.732

3.  Calibration of fluorescence imaging for tumor surgical margin delineation: multistep registration of fluorescence and histological images.

Authors:  Yang Jiang; Emily J Girard; Fiona Pakiam; Eric J Seibel
Journal:  J Med Imaging (Bellingham)       Date:  2019-05-11

4.  Method for coregistration of optical measurements of breast tissue with histopathology: the importance of accounting for tissue deformations.

Authors:  Lisanne de Boer; Esther Kho; Jasper Nijkamp; Koen Van de Vijver; Henricus J C Sterenborg; Leon Ter Beek; Theo J Ruers
Journal:  J Biomed Opt       Date:  2019-07       Impact factor: 3.170

Review 5.  A review of the application of machine learning in molecular imaging.

Authors:  Lin Yin; Zhen Cao; Kun Wang; Jie Tian; Xing Yang; Jianhua Zhang
Journal:  Ann Transl Med       Date:  2021-05
  5 in total

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