Literature DB >> 29295934

Computational modeling of three-dimensional ECM-rigidity sensing to guide directed cell migration.

Min-Cheol Kim1, Yaron R Silberberg2,3, Rohan Abeyaratne4, Roger D Kamm4,2,5, H Harry Asada1,2.   

Abstract

Filopodia have a key role in sensing both chemical and mechanical cues in surrounding extracellular matrix (ECM). However, quantitative understanding is still missing in the filopodial mechanosensing of local ECM stiffness, resulting from dynamic interactions between filopodia and the surrounding 3D ECM fibers. Here we present a method for characterizing the stiffness of ECM that is sensed by filopodia based on the theory of elasticity and discrete ECM fiber. We have applied this method to a filopodial mechanosensing model for predicting directed cell migration toward stiffer ECM. This model provides us with a distribution of force and displacement as well as their time rate of changes near the tip of a filopodium when it is bound to the surrounding ECM fibers. Aggregating these effects in each local region of 3D ECM, we express the local ECM stiffness sensed by the cell and explain polarity in the cellular durotaxis mechanism.

Entities:  

Keywords:  ECM; computational modeling; durotaxis; filopodia; mechanosensing

Mesh:

Year:  2018        PMID: 29295934      PMCID: PMC5776995          DOI: 10.1073/pnas.1717230115

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Acto-myosin based response to stiffness and rigidity sensing.

Authors:  Jonathan Fouchard; Démosthène Mitrossilis; Atef Asnacios
Journal:  Cell Adh Migr       Date:  2011-01-01       Impact factor: 3.405

2.  Filopodial focal complexes direct adhesion and force generation towards filopodia outgrowth.

Authors:  Bernd Hoffmann; Claudia Schäfer
Journal:  Cell Adh Migr       Date:  2010-04-08       Impact factor: 3.405

3.  Complex matrix remodeling and durotaxis can emerge from simple rules for cell-matrix interaction in agent-based models.

Authors:  James W Reinhardt; Daniel A Krakauer; Keith J Gooch
Journal:  J Biomech Eng       Date:  2013-07-01       Impact factor: 2.097

4.  The glycosphingolipid globotriaosylceramide in the metastatic transformation of colon cancer.

Authors:  Olga Kovbasnjuk; Rakhilya Mourtazina; Boris Baibakov; Thomas Wang; Christian Elowsky; Michael A Choti; Anne Kane; Mark Donowitz
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-19       Impact factor: 11.205

5.  Tuning the elastic modulus of hydrated collagen fibrils.

Authors:  Colin A Grant; David J Brockwell; Sheena E Radford; Neil H Thomson
Journal:  Biophys J       Date:  2009-12-02       Impact factor: 4.033

6.  Long-range force transmission in fibrous matrices enabled by tension-driven alignment of fibers.

Authors:  Hailong Wang; A S Abhilash; Christopher S Chen; Rebecca G Wells; Vivek B Shenoy
Journal:  Biophys J       Date:  2014-12-02       Impact factor: 4.033

7.  Collective cell durotaxis emerges from long-range intercellular force transmission.

Authors:  Raimon Sunyer; Vito Conte; Jorge Escribano; Alberto Elosegui-Artola; Anna Labernadie; Léo Valon; Daniel Navajas; José Manuel García-Aznar; José J Muñoz; Pere Roca-Cusachs; Xavier Trepat
Journal:  Science       Date:  2016-09-09       Impact factor: 47.728

8.  Fibroblasts probe substrate rigidity with filopodia extensions before occupying an area.

Authors:  Stephanie Wong; Wei-Hui Guo; Yu-Li Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-17       Impact factor: 11.205

9.  Force engages vinculin and promotes tumor progression by enhancing PI3K activation of phosphatidylinositol (3,4,5)-triphosphate.

Authors:  Matthew G Rubashkin; Luke Cassereau; Russell Bainer; Christopher C DuFort; Yoshihiro Yui; Guanqing Ou; Matthew J Paszek; Michael W Davidson; Yunn-Yi Chen; Valerie M Weaver
Journal:  Cancer Res       Date:  2014-09-01       Impact factor: 12.701

Review 10.  Filopodia in cell adhesion, 3D migration and cancer cell invasion.

Authors:  Guillaume Jacquemet; Hellyeh Hamidi; Johanna Ivaska
Journal:  Curr Opin Cell Biol       Date:  2015-07-14       Impact factor: 8.382

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  32 in total

1.  Five-dimensional two-photon volumetric microscopy of in-vivo dynamic activities using liquid lens remote focusing.

Authors:  Kayvan Forouhesh Tehrani; Charles V Latchoumane; W Michael Southern; Emily G Pendleton; Ana Maslesa; Lohitash Karumbaiah; Jarrod A Call; Luke J Mortensen
Journal:  Biomed Opt Express       Date:  2019-06-26       Impact factor: 3.732

2.  The role of actin protrusion dynamics in cell migration through a degradable viscoelastic extracellular matrix: Insights from a computational model.

Authors:  Tommy Heck; Diego A Vargas; Bart Smeets; Herman Ramon; Paul Van Liedekerke; Hans Van Oosterwyck
Journal:  PLoS Comput Biol       Date:  2020-01-13       Impact factor: 4.475

3.  Cell-substrate mechanics guide collective cell migration through intercellular adhesion: a dynamic finite element cellular model.

Authors:  Jieling Zhao; Farid Manuchehrfar; Jie Liang
Journal:  Biomech Model Mechanobiol       Date:  2020-02-27

4.  A quantitative high-resolution computational mechanics cell model for growing and regenerating tissues.

Authors:  Paul Van Liedekerke; Johannes Neitsch; Tim Johann; Enrico Warmt; Ismael Gonzàlez-Valverde; Stefan Hoehme; Steffen Grosser; Josef Kaes; Dirk Drasdo
Journal:  Biomech Model Mechanobiol       Date:  2019-11-20

5.  A minimal mechanosensing model predicts keratocyte evolution on flexible substrates.

Authors:  Zhiwen Zhang; Phoebus Rosakis; Thomas Y Hou; Guruswami Ravichandran
Journal:  J R Soc Interface       Date:  2020-05-06       Impact factor: 4.118

6.  An Active Biomechanical Model of Cell Adhesion Actuated by Intracellular Tensioning-Taxis.

Authors:  Yuqiang Fang; He Gong; Ruiguo Yang; King W C Lai; Meiling Quan
Journal:  Biophys J       Date:  2020-04-23       Impact factor: 4.033

7.  Are the Effects of Independent Biophysical Factors Linearly Additive? A 3D Tumor Migration Model.

Authors:  Ang Li; Meng Sun; Fabian Spill; Ren Sun; Muhammad H Zaman
Journal:  Biophys J       Date:  2019-10-02       Impact factor: 4.033

8.  Computational modelling of cell motility modes emerging from cell-matrix adhesion dynamics.

Authors:  Leonie van Steijn; Inge M N Wortel; Clément Sire; Loïc Dupré; Guy Theraulaz; Roeland M H Merks
Journal:  PLoS Comput Biol       Date:  2022-02-14       Impact factor: 4.475

Review 9.  Tumour invasion and dissemination.

Authors:  Ryan Lusby; Philip Dunne; Vijay K Tiwari
Journal:  Biochem Soc Trans       Date:  2022-06-30       Impact factor: 4.919

10.  Integrated in silico and 3D in vitro model of macrophage migration in response to physical and chemical factors in the tumor microenvironment.

Authors:  Sharon Wei Ling Lee; R J Seager; Felix Litvak; Fabian Spill; Je Lin Sieow; Penny Hweixian Leong; Dillip Kumar; Alrina Shin Min Tan; Siew Cheng Wong; Giulia Adriani; Muhammad Hamid Zaman; And Roger D Kamm
Journal:  Integr Biol (Camb)       Date:  2020-04-20       Impact factor: 2.192

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